Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   A2G56_RS03500 Genome accession   NZ_CP014835
Coordinates   782299..784047 (-) Length   582 a.a.
NCBI ID   WP_062709095.1    Uniprot ID   -
Organism   Streptococcus halotolerans strain HTS9     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 777299..789047
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2G56_RS03480 - 778471..779646 (-) 1176 WP_099091456.1 CapA family protein -
  A2G56_RS03485 rpsU 780041..780217 (-) 177 WP_002884573.1 30S ribosomal protein S21 -
  A2G56_RS03490 - 780301..780873 (-) 573 WP_062712422.1 uracil-DNA glycosylase family protein -
  A2G56_RS03495 - 781092..781823 (-) 732 WP_062709092.1 GDSL-type esterase/lipase family protein -
  A2G56_RS11060 - 781867..781995 (-) 129 WP_257721920.1 hypothetical protein -
  A2G56_RS03500 rcrQ 782299..784047 (-) 1749 WP_062709095.1 ABC transporter ATP-binding protein Regulator
  A2G56_RS03505 rcrP 784037..785797 (-) 1761 WP_062712424.1 ABC transporter ATP-binding protein Regulator
  A2G56_RS03510 - 785839..786282 (-) 444 WP_062709098.1 MarR family winged helix-turn-helix transcriptional regulator -
  A2G56_RS03515 - 787180..788388 (-) 1209 WP_237334436.1 DegT/DnrJ/EryC1/StrS family aminotransferase -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64313.60 Da        Isoelectric Point: 7.0212

>NTDB_id=174458 A2G56_RS03500 WP_062709095.1 782299..784047(-) (rcrQ) [Streptococcus halotolerans strain HTS9]
MKIKKKTLINQSLPFLKGFRLMFGLAIMFTICSSVITVIGPDKLKEITDVITTGITGKVDIAKIKGIGFQLALLYGGGAI
LSYSASFIIATIIQHFSKRMRTAIADKINCVPLSYFDGHSQGDTLSRVTNDVDNMTQALNQSLTTLVSASVLLTGSIIMM
FKTNVIMAGTAIGSVLAGFLLSVVIMMKSQPLFRRQQDNLAAVNGYVEEIYTGHNLVISYNAREQAKSAFNQLNQNLYNS
MWQSQFFSGIMMPMMQFIGNFGYVMVCLVGARLVIDGDITMGTIVAFMTYVRIFSQPLGQIAQGATQMQTVSATMGRIFE
FLNALEMEDETDKSQQLSQVKGYVDFDQVTFGYTKDKTVINAFSAQAKPGQKVAIVGPTGAGKTTIVNLLMRFYETNSGS
IRIDHVNVKDMKREEVHDAFSMVLQDTWLFEGTIKENLIYNQEHITNEQVVEAAKAVGIHHFIMTLPKGYDSVLDDSLSL
SVGQKQLLTIARALLKNAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFIIAHRLSTIRNADLILVMKDGSIIEQGN
HDALMAENGFYADLYNSQFEKA

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=174458 A2G56_RS03500 WP_062709095.1 782299..784047(-) (rcrQ) [Streptococcus halotolerans strain HTS9]
GTGAAAATTAAGAAAAAAACGTTAATCAACCAGTCCCTTCCTTTTTTGAAAGGGTTCCGCTTGATGTTTGGACTGGCTAT
TATGTTTACGATATGTTCAAGTGTCATTACTGTTATCGGACCTGATAAGTTAAAAGAAATCACCGATGTGATTACGACAG
GAATTACTGGTAAAGTTGATATAGCTAAAATCAAAGGTATTGGTTTCCAGCTAGCATTACTATATGGTGGTGGCGCCATT
TTGTCTTATTCAGCTAGTTTTATCATTGCAACTATAATCCAGCATTTCTCAAAGCGCATGCGCACAGCCATTGCTGATAA
AATCAACTGTGTGCCCCTGTCTTACTTTGATGGTCATTCACAAGGAGATACCTTATCTCGTGTGACGAATGATGTGGACA
ATATGACCCAAGCGCTTAACCAGAGTTTGACCACACTAGTTTCAGCTAGCGTCCTTTTGACTGGGTCTATTATCATGATG
TTTAAAACCAATGTCATCATGGCTGGGACAGCTATCGGATCGGTTCTAGCAGGCTTTTTACTTAGCGTGGTCATCATGAT
GAAAAGTCAGCCTCTCTTTAGACGTCAGCAAGATAATCTAGCTGCGGTTAATGGTTACGTTGAAGAAATCTACACAGGTC
ACAATCTTGTCATCTCTTACAATGCTAGGGAGCAAGCTAAGTCAGCCTTTAACCAACTCAATCAAAACCTTTATAACAGT
ATGTGGCAATCGCAATTCTTCTCTGGAATTATGATGCCCATGATGCAGTTTATCGGTAACTTTGGTTATGTTATGGTCTG
TTTAGTTGGTGCCCGATTAGTGATTGATGGCGATATCACTATGGGAACAATCGTAGCCTTTATGACCTATGTTCGTATCT
TCTCACAGCCTCTTGGCCAAATAGCTCAAGGAGCTACACAAATGCAAACTGTCTCCGCAACAATGGGGCGAATCTTCGAA
TTTCTTAATGCTCTAGAAATGGAAGACGAAACTGATAAAAGTCAGCAATTATCACAGGTCAAGGGTTATGTTGACTTTGA
TCAGGTGACGTTTGGTTATACCAAAGACAAGACTGTTATTAATGCTTTTTCAGCGCAAGCCAAACCAGGTCAAAAGGTTG
CTATTGTTGGTCCAACAGGTGCCGGTAAGACAACGATTGTTAACTTGCTGATGCGTTTTTACGAAACCAATAGCGGTAGT
ATTCGAATTGACCACGTTAATGTCAAGGATATGAAACGAGAAGAAGTTCACGATGCCTTTTCAATGGTCTTGCAGGATAC
TTGGTTATTTGAAGGGACTATTAAGGAAAATCTGATTTACAATCAGGAGCATATAACAAACGAGCAAGTGGTTGAGGCAG
CTAAAGCTGTTGGCATTCATCACTTTATCATGACCCTTCCTAAAGGGTACGATAGTGTCTTGGACGATAGTCTGAGCTTA
TCTGTCGGTCAGAAACAGCTTTTGACCATTGCGCGTGCTCTTTTGAAAAATGCACCGCTTTTGATTTTAGATGAAGCCAC
ATCATCTGTTGATACTCGCACGGAAGAGCTGATTCAAAAAGCTATGGACAAACTCATGGAAGGGAGAACCTCTTTTATCA
TTGCCCATCGTCTATCAACCATCCGTAACGCCGACTTAATCTTAGTCATGAAAGATGGAAGCATCATTGAACAGGGCAAT
CATGATGCCTTGATGGCTGAAAATGGTTTCTATGCTGACCTCTATAACTCTCAATTTGAAAAAGCTTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(24-298)

ABC transporter (ABC_tran)

(362-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

73.057

99.485

0.727

Multiple sequence alignment