Detailed information NTG0174180

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: B34_RS11955
• Genome accession: NZ_CP014793
• Coordinates: 2204588..2205745 (-)
• Length: 385 a.a.
• NCBI ID: WP_003185733.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain SCDB 34
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2199588..2210745

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B34_RS11925 (B34_02419)	-	2199832..2200251 (-)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-
B34_RS11930	comFC	2200310..2201044 (-)	735	WP_011198352.1	amidophosphoribosyltransferase	Machinery gene
B34_RS11935 (B34_02420)	-	2201001..2201285 (-)	285	WP_003185718.1	late competence development ComFB family protein	-
B34_RS11940 (B34_02421)	comFA	2201340..2202734 (-)	1395	WP_003185720.1	DEAD/DEAH box helicase	Machinery gene
B34_RS11945 (B34_02422)	-	2202855..2203697 (-)	843	WP_003185726.1	DegV family protein	-
B34_RS11950 (B34_02423)	degU	2203817..2204506 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
B34_RS11955 (B34_02424)	degS	2204588..2205745 (-)	1158	WP_003185733.1	sensor histidine kinase	Regulator
B34_RS11960 (B34_02425)	-	2205959..2206597 (+)	639	WP_003185736.1	YigZ family protein	-
B34_RS11965 (B34_02426)	-	2206612..2207688 (+)	1077	WP_003185737.1	LCP family protein	-
B34_RS11970 (B34_02427)	-	2207773..2208147 (-)	375	WP_080624115.1	YunG family protein	-
B34_RS11975 (B34_02428)	-	2208267..2209331 (-)	1065	WP_003185739.1	glycosyltransferase family 4 protein	-
B34_RS11980 (B34_02429)	tuaH	2209462..2210643 (-)	1182	WP_011198354.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44636.36 Da
• Isoelectric Point: 6.7863

>NTDB_id=174180 B34_RS11955 WP_003185733.1 2204588..2205745(-) (degS) [Bacillus licheniformis strain SCDB 34]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=174180 B34_RS11955 WP_003185733.1 2204588..2205745(-) (degS) [Bacillus licheniformis strain SCDB 34]
GTGAGCGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAAGTCTTTCAAATCGGAGAGCAGTCCCGCCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACAATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACTACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTT
GAAGATGCGCAGGCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATTCACGACGGTCCTGCGCAAATGCTGGCCAACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TATTCCGGCTTGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATATTGATTAAAGTTCCACTGTCTTTGTAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894