Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | B34_RS06340 | Genome accession | NZ_CP014793 |
| Coordinates | 1148145..1149209 (-) | Length | 354 a.a. |
| NCBI ID | WP_003183477.1 | Uniprot ID | Q8VQ73 |
| Organism | Bacillus licheniformis strain SCDB 34 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1143145..1154209
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B34_RS06315 (B34_01283) | - | 1143194..1143616 (+) | 423 | WP_231124461.1 | helix-turn-helix domain-containing protein | - |
| B34_RS06320 (B34_01284) | - | 1143812..1144312 (+) | 501 | WP_080624078.1 | ImmA/IrrE family metallo-endopeptidase | - |
| B34_RS06325 (B34_01285) | - | 1144305..1145477 (+) | 1173 | WP_080624079.1 | hypothetical protein | - |
| B34_RS06330 (B34_01286) | - | 1145524..1147056 (+) | 1533 | WP_167511160.1 | recombinase family protein | - |
| B34_RS06335 (B34_01287) | comGB | 1147121..1148155 (-) | 1035 | WP_011198115.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| B34_RS06340 (B34_01288) | comGA | 1148145..1149209 (-) | 1065 | WP_003183477.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| B34_RS06345 (B34_01289) | - | 1149366..1150205 (-) | 840 | WP_071583678.1 | STAS domain-containing protein | - |
| B34_RS06355 (B34_01291) | - | 1150447..1150824 (-) | 378 | WP_003183482.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| B34_RS06360 (B34_01292) | - | 1151033..1151278 (+) | 246 | WP_003183483.1 | DUF2626 domain-containing protein | - |
| B34_RS06365 (B34_01293) | - | 1151316..1151954 (-) | 639 | WP_071583677.1 | MBL fold metallo-hydrolase | - |
| B34_RS06370 (B34_01294) | - | 1152110..1152283 (+) | 174 | WP_003183486.1 | DUF2759 domain-containing protein | - |
| B34_RS06375 (B34_01295) | - | 1152344..1152658 (-) | 315 | WP_003183487.1 | MTH1187 family thiamine-binding protein | - |
| B34_RS06380 (B34_01296) | - | 1152674..1153783 (-) | 1110 | WP_003183488.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 354 a.a. Molecular weight: 39727.31 Da Isoelectric Point: 9.1029
>NTDB_id=174159 B34_RS06340 WP_003183477.1 1148145..1149209(-) (comGA) [Bacillus licheniformis strain SCDB 34]
MYTIESLSGRLIDEAYRMKASDIHIVPGEKEAVVRFRIDDELFQKDGLTRNECSRLISHFKFLSSMDIGERRLPQSGALT
LYINREPVHLRMSTLPTIHDESLVIRLLPKMSSKPLTKLSLFPSATFKLLSFLKHSHGLMLFTGPTGSGKTTTLYSLIDY
AKRHFKRNIITLEDPVESRSENILQVQVNEKAGMTYSAGLKAVLRHDPDMIILGEIRDAETAQIAVRAALTGHLVLSSMH
AKNAKGAIYRLLELGVDMTEIEQTLVAVSAQRLVDIVCPFCGDSCTLYCRLSRPVRRASVFELLYGKSLNLCIEEAKGRC
GGIKTDTLKMLIRKGIALGYLPSKTYERWIGHED
MYTIESLSGRLIDEAYRMKASDIHIVPGEKEAVVRFRIDDELFQKDGLTRNECSRLISHFKFLSSMDIGERRLPQSGALT
LYINREPVHLRMSTLPTIHDESLVIRLLPKMSSKPLTKLSLFPSATFKLLSFLKHSHGLMLFTGPTGSGKTTTLYSLIDY
AKRHFKRNIITLEDPVESRSENILQVQVNEKAGMTYSAGLKAVLRHDPDMIILGEIRDAETAQIAVRAALTGHLVLSSMH
AKNAKGAIYRLLELGVDMTEIEQTLVAVSAQRLVDIVCPFCGDSCTLYCRLSRPVRRASVFELLYGKSLNLCIEEAKGRC
GGIKTDTLKMLIRKGIALGYLPSKTYERWIGHED
Nucleotide
Download Length: 1065 bp
>NTDB_id=174159 B34_RS06340 WP_003183477.1 1148145..1149209(-) (comGA) [Bacillus licheniformis strain SCDB 34]
TTGTACACGATCGAATCATTAAGCGGAAGATTAATTGATGAGGCATATAGAATGAAGGCGTCAGACATTCATATTGTTCC
CGGTGAAAAAGAGGCGGTGGTACGCTTCAGGATTGATGACGAACTGTTTCAAAAAGACGGATTAACGAGAAATGAGTGCT
CTAGACTCATTTCTCACTTTAAATTTCTTTCTTCGATGGACATTGGCGAGAGACGGCTGCCGCAAAGCGGGGCTTTAACT
CTTTATATCAACCGTGAGCCCGTTCATTTAAGGATGTCCACTCTGCCCACCATCCATGATGAAAGCTTGGTCATCAGGCT
TCTTCCCAAGATGAGCAGCAAGCCGCTCACAAAGCTCTCATTGTTCCCGAGTGCAACATTCAAGCTGCTGTCTTTTCTGA
AGCATTCCCACGGATTAATGCTTTTCACCGGCCCGACAGGCTCGGGAAAAACGACAACACTCTATTCTTTAATTGACTAC
GCCAAGCGGCATTTTAAGCGAAATATCATTACGTTGGAAGACCCGGTCGAATCAAGAAGCGAAAACATTTTGCAAGTACA
AGTGAACGAAAAAGCGGGCATGACTTATTCTGCGGGGTTGAAGGCGGTGCTGCGCCACGATCCGGACATGATCATCCTAG
GGGAAATTCGCGATGCCGAAACAGCCCAAATCGCAGTCAGGGCAGCTTTGACGGGACACCTTGTTCTATCGAGCATGCAT
GCGAAAAATGCTAAAGGTGCGATATACAGGCTGCTCGAGCTCGGCGTTGATATGACAGAAATTGAACAAACATTGGTCGC
AGTCAGCGCCCAGCGTCTTGTCGATATCGTCTGTCCGTTTTGCGGCGACAGCTGCACTTTGTATTGCAGATTGTCGAGAC
CAGTTAGAAGAGCAAGCGTCTTTGAACTTTTGTACGGAAAAAGCCTTAATCTCTGCATCGAAGAAGCAAAAGGCAGATGC
GGTGGCATCAAAACAGACACCTTAAAAATGCTGATCCGCAAGGGAATAGCACTCGGATATCTGCCGTCGAAAACTTATGA
ACGCTGGATAGGCCATGAAGATTAA
TTGTACACGATCGAATCATTAAGCGGAAGATTAATTGATGAGGCATATAGAATGAAGGCGTCAGACATTCATATTGTTCC
CGGTGAAAAAGAGGCGGTGGTACGCTTCAGGATTGATGACGAACTGTTTCAAAAAGACGGATTAACGAGAAATGAGTGCT
CTAGACTCATTTCTCACTTTAAATTTCTTTCTTCGATGGACATTGGCGAGAGACGGCTGCCGCAAAGCGGGGCTTTAACT
CTTTATATCAACCGTGAGCCCGTTCATTTAAGGATGTCCACTCTGCCCACCATCCATGATGAAAGCTTGGTCATCAGGCT
TCTTCCCAAGATGAGCAGCAAGCCGCTCACAAAGCTCTCATTGTTCCCGAGTGCAACATTCAAGCTGCTGTCTTTTCTGA
AGCATTCCCACGGATTAATGCTTTTCACCGGCCCGACAGGCTCGGGAAAAACGACAACACTCTATTCTTTAATTGACTAC
GCCAAGCGGCATTTTAAGCGAAATATCATTACGTTGGAAGACCCGGTCGAATCAAGAAGCGAAAACATTTTGCAAGTACA
AGTGAACGAAAAAGCGGGCATGACTTATTCTGCGGGGTTGAAGGCGGTGCTGCGCCACGATCCGGACATGATCATCCTAG
GGGAAATTCGCGATGCCGAAACAGCCCAAATCGCAGTCAGGGCAGCTTTGACGGGACACCTTGTTCTATCGAGCATGCAT
GCGAAAAATGCTAAAGGTGCGATATACAGGCTGCTCGAGCTCGGCGTTGATATGACAGAAATTGAACAAACATTGGTCGC
AGTCAGCGCCCAGCGTCTTGTCGATATCGTCTGTCCGTTTTGCGGCGACAGCTGCACTTTGTATTGCAGATTGTCGAGAC
CAGTTAGAAGAGCAAGCGTCTTTGAACTTTTGTACGGAAAAAGCCTTAATCTCTGCATCGAAGAAGCAAAAGGCAGATGC
GGTGGCATCAAAACAGACACCTTAAAAATGCTGATCCGCAAGGGAATAGCACTCGGATATCTGCCGTCGAAAACTTATGA
ACGCTGGATAGGCCATGAAGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
66.949 |
100 |
0.669 |