Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   CKU_RS12830 Genome accession   NZ_CP014791
Coordinates   2562816..2563703 (-) Length   295 a.a.
NCBI ID   WP_000143415.1    Uniprot ID   -
Organism   Staphylococcus aureus strain MCRF184     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2557816..2568703
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CKU_RS12795 - 2557823..2557911 (+) 89 Protein_2444 hypothetical protein -
  CKU_RS12800 (CKU_2373) - 2558019..2558516 (-) 498 WP_001065267.1 glutathione peroxidase -
  CKU_RS12805 - 2558526..2558786 (-) 261 WP_072468805.1 hypothetical protein -
  CKU_RS12810 (CKU_2374) - 2559168..2559281 (-) 114 WP_072468803.1 hypothetical protein -
  CKU_RS12820 (CKU_2375) - 2559956..2561956 (-) 2001 WP_000776737.1 ABC transporter permease -
  CKU_RS12825 (CKU_2376) - 2561953..2562708 (-) 756 WP_000923765.1 ABC transporter ATP-binding protein -
  CKU_RS12830 (CKU_2377) braS 2562816..2563703 (-) 888 WP_000143415.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  CKU_RS12835 (CKU_2378) braR 2563714..2564379 (-) 666 WP_000697883.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  CKU_RS12840 (CKU_2379) - 2564405..2564605 (-) 201 WP_000604722.1 hypothetical protein -
  CKU_RS12850 (CKU_2380) - 2564803..2566227 (+) 1425 WP_000953745.1 alkaline phosphatase -
  CKU_RS14115 (CKU_2381) - 2566264..2566365 (-) 102 WP_000731972.1 SE2200 family small protein -
  CKU_RS12855 (CKU_2382) - 2566487..2566942 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  CKU_RS12860 (CKU_2383) - 2567182..2567943 (-) 762 WP_000323450.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 34059.30 Da        Isoelectric Point: 5.6141

>NTDB_id=174142 CKU_RS12830 WP_000143415.1 2562816..2563703(-) (braS) [Staphylococcus aureus strain MCRF184]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKDDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEGDLPK
IFDKGYSGYNGQRQSNSTGIGLFIVKQISNHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=174142 CKU_RS12830 WP_000143415.1 2562816..2563703(-) (braS) [Staphylococcus aureus strain MCRF184]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAGATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCGAATGTTGTGAATCGTGTTCGTCAAGAGGTAATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATAAACAATATTATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGAATCGGTATTAGTGAGGGAGACTTACCTAAA
ATATTCGACAAAGGTTATTCGGGGTATAATGGACAACGTCAAAGTAATTCAACTGGGATTGGCTTATTTATTGTAAAGCA
AATTTCAAATCACACTAATCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(191-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

97.966

100

0.98

Multiple sequence alignment