Detailed information NTG0173797

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BSR20_RS10245
• Genome accession: NZ_CP018189
• Coordinates: 2179331..2180431 (+)
• Length: 366 a.a.
• NCBI ID: WP_156209990.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain ICDC3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2174331..2185431

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR20_RS10220 (BSR20_10330)	pgsA	2174873..2175415 (-)	543	WP_002885640.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
BSR20_RS10225 (BSR20_10335)	-	2175428..2176285 (-)	858	WP_156209986.1	helix-turn-helix domain-containing protein	-
BSR20_RS10230 (BSR20_10340)	yfmH	2176344..2177621 (-)	1278	WP_156209987.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
BSR20_RS10235 (BSR20_10345)	yfmF	2177623..2178873 (-)	1251	WP_156209988.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
BSR20_RS10240 (BSR20_10350)	yaaA	2178951..2179328 (+)	378	WP_156209989.1	S4 domain-containing protein YaaA	-
BSR20_RS10245 (BSR20_10355)	recF	2179331..2180431 (+)	1101	WP_156209990.1	DNA replication/repair protein RecF	Machinery gene
BSR20_RS10250 (BSR20_10360)	guaB	2180613..2182094 (-)	1482	WP_013991341.1	IMP dehydrogenase	-
BSR20_RS10255 (BSR20_10365)	trpS	2182273..2183295 (-)	1023	WP_118172343.1	tryptophan--tRNA ligase	-
BSR20_RS10260 (BSR20_10370)	-	2183724..2184596 (+)	873	WP_014632477.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42232.27 Da
• Isoelectric Point: 8.4088

>NTDB_id=173797 BSR20_RS10245 WP_156209990.1 2179331..2180431(+) (recF) [Streptococcus salivarius strain ICDC3]
MWLEKIDIQHFRNYTEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTRSDKELIQFQQNTLKLNGIVHRHSGK
LPLEISLSNKGRITKVNHLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSSYNHVLKQR
NAYLKSTDNVDINFLSVLDEQLSDFGTRVIEHRLEFIKQLEEEADRHHSNLSNQIERLKISYESNIPLENNKVIRESFLT
TLKQNHKRDIFKKNTGVGPHRDDLTFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTGEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPDLKTFLVKNGNIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=173797 BSR20_RS10245 WP_156209990.1 2179331..2180431(+) (recF) [Streptococcus salivarius strain ICDC3]
ATGTGGCTCGAAAAAATTGATATTCAACACTTTAGAAATTATACTGAAGCCTCTGTGAGCTTCTCACCTCATCTCAATAT
TTTTCTTGGTCGCAACGCTCAAGGAAAAACAAATATTCTTGAGGCAATCTATTTTCTAGCATTGACACGTAGCCATCGGA
CCCGTTCAGATAAGGAACTGATTCAATTTCAGCAAAATACTCTCAAACTGAACGGCATCGTGCATCGTCATAGTGGGAAG
CTACCTCTGGAAATCAGTTTATCTAATAAAGGACGCATAACAAAGGTTAACCACCTCAAACAAGCTAAATTATCCGATTA
TATCGGTCACATGACTGTAGTGCTATTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGCCTGAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTATCTCTCAGACTTATCAAGTTATAATCATGTACTCAAACAACGT
AATGCTTATCTCAAATCTACTGACAATGTAGACATTAATTTCCTCTCAGTGTTAGATGAACAGCTTTCCGATTTTGGAAC
ACGAGTTATCGAACATAGACTAGAATTTATCAAGCAATTAGAGGAGGAGGCAGATAGACATCATAGTAACCTCTCAAATC
AGATAGAGCGCCTTAAAATCTCCTACGAATCTAATATCCCACTGGAAAATAACAAAGTTATTCGCGAATCATTTTTAACC
ACGTTAAAGCAAAATCACAAAAGAGATATCTTCAAAAAGAACACTGGTGTTGGTCCGCATAGGGATGATTTAACATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAGGGGCAGCAACGTAGCCTCATTCTTTCTTTAAAAATGGCTGAGATTG
CTCTGATAAAAAAAGTAACAGGTGAATTTCCTATTCTTCTCCTCGATGATGTCATGAGTGAGCTTGACAACCACCGTCAA
CTTAAACTGTTAGAAAGTATTGACGAAGAGGTTCAAACCTTCATGACGACAACTTCACTTGATCATCTGAGTAACCTACC
ACCTGATTTAAAGACCTTCTTAGTCAAGAATGGTAATATTTATGAAAAACAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-343)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.084	97.814	0.637
recF	Bacillus subtilis subsp. subtilis str. 168	43.902	100	0.443