Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/blpH   Type   Regulator
Locus tag   BSR19_RS11565 Genome accession   NZ_CP018187
Coordinates   459284..460114 (+) Length   276 a.a.
NCBI ID   WP_231605976.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ICDC2     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 454284..465114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR19_RS02365 (BSR19_02365) comE/blpR 456289..457041 (+) 753 WP_060973375.1 LytR/AlgR family response regulator transcription factor Regulator
  BSR19_RS02370 (BSR19_02370) - 457176..457841 (+) 666 WP_156246406.1 DUF6287 domain-containing protein -
  BSR19_RS02375 (BSR19_02375) comE/blpR 458089..458823 (+) 735 WP_060973247.1 response regulator transcription factor Regulator
  BSR19_RS11560 - 458820..459104 (+) 285 WP_231605975.1 hypothetical protein -
  BSR19_RS11565 comD/blpH 459284..460114 (+) 831 WP_231605976.1 sensor histidine kinase Regulator
  BSR19_RS02385 (BSR19_02385) - 460212..460778 (+) 567 WP_156246408.1 transcriptional regulator -

Sequence

Protein


Download         Length: 276 a.a.        Molecular weight: 31262.91 Da        Isoelectric Point: 5.4418

>NTDB_id=173687 BSR19_RS11565 WP_231605976.1 459284..460114(+) (comD/blpH) [Streptococcus salivarius strain ICDC2]
MLSYALLLQYITFFVQQSPGGRDWHVYLVVTYALLFLATLVYINATFSERLKEEVLLQKDRQMSDLAHYSQQIERLYTDL
RRFRHDYLNVLSSIKYGIDSKDIAIISDIYDNILEKTKTRIEGKQYEIANLINIKDEAVKGVLASKILEAQGQSITVHLE
VSDVFEVSRMELLDFITVLSIFLDNAIEGSLDSSTKEVNIALISGETKVVIVENTIAQESINTVGIFKLGRSSKGEGRGI
GLSTVREILGKYPNCSLSTQSKDYRFKQTLKIEDVV

Nucleotide


Download         Length: 831 bp        

>NTDB_id=173687 BSR19_RS11565 WP_231605976.1 459284..460114(+) (comD/blpH) [Streptococcus salivarius strain ICDC2]
ATGTTATCTTATGCCCTCCTTCTCCAATATATTACCTTTTTTGTGCAACAGAGCCCTGGAGGAAGAGATTGGCATGTTTA
TCTCGTGGTGACTTATGCTTTACTCTTTCTTGCGACCCTTGTTTATATCAATGCGACCTTCAGTGAGAGGCTAAAAGAAG
AAGTCCTACTCCAAAAAGATAGGCAAATGAGTGATTTGGCTCATTATAGTCAACAAATCGAGAGACTCTATACTGATCTT
CGTCGATTTAGGCATGATTACCTAAATGTTTTGTCTAGTATCAAATATGGCATTGACTCCAAAGATATAGCTATCATTTC
TGATATCTACGATAACATTCTTGAAAAAACAAAGACTCGGATTGAGGGAAAACAGTACGAAATTGCCAACTTGATTAATA
TTAAAGATGAAGCCGTTAAAGGTGTCTTGGCTAGTAAAATCTTGGAAGCACAGGGACAGTCTATTACCGTTCACCTTGAG
GTCAGCGACGTCTTTGAAGTATCGAGGATGGAATTGTTGGATTTCATAACGGTGCTGTCCATCTTCTTGGATAATGCTAT
TGAGGGGAGTTTGGATAGCAGTACTAAAGAAGTGAACATTGCTCTTATCAGTGGAGAGACGAAGGTAGTAATAGTGGAGA
ATACCATTGCTCAAGAATCTATCAATACAGTCGGTATCTTTAAACTTGGCCGCTCAAGTAAAGGAGAGGGACGTGGTATA
GGTCTGTCCACTGTTCGAGAGATTTTAGGGAAGTACCCTAATTGTTCTTTGTCAACACAATCTAAAGACTATCGTTTTAA
ACAGACGCTAAAAATAGAAGATGTGGTTTGA

Domains

Predicted by InterProScan.

GHKL domain (HATPase_c_5)

(170-272)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

42.446

100

0.428

Multiple sequence alignment