Detailed information NTG0173684

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BSR19_RS10445
• Genome accession: NZ_CP018187
• Coordinates: 2240858..2241958 (+)
• Length: 366 a.a.
• NCBI ID: WP_013991340.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain ICDC2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2235858..2246958

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR19_RS10420 (BSR19_10570)	pgsA	2236400..2236942 (-)	543	WP_002885640.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
BSR19_RS10425 (BSR19_10575)	-	2236955..2237812 (-)	858	WP_013991336.1	helix-turn-helix domain-containing protein	-
BSR19_RS10430 (BSR19_10580)	yfmH	2237871..2239148 (-)	1278	WP_014632479.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
BSR19_RS10435 (BSR19_10585)	yfmF	2239150..2240400 (-)	1251	WP_013991338.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
BSR19_RS10440 (BSR19_10590)	yaaA	2240478..2240855 (+)	378	WP_049528182.1	S4 domain-containing protein YaaA	-
BSR19_RS10445 (BSR19_10595)	recF	2240858..2241958 (+)	1101	WP_013991340.1	DNA replication/repair protein RecF	Machinery gene
BSR19_RS10450 (BSR19_10600)	guaB	2242140..2243621 (-)	1482	WP_021144763.1	IMP dehydrogenase	-
BSR19_RS10455 (BSR19_10605)	trpS	2243800..2244822 (-)	1023	WP_037599375.1	tryptophan--tRNA ligase	-
BSR19_RS10460 (BSR19_10610)	-	2245251..2246123 (+)	873	WP_049545979.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42233.26 Da
• Isoelectric Point: 7.7930

>NTDB_id=173684 BSR19_RS10445 WP_013991340.1 2240858..2241958(+) (recF) [Streptococcus salivarius strain ICDC2]
MWLEKIDIQHFRNYTEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTRSDKELIQFQQNTLKLNGIVHRHSGK
LPLEISLSNKGRITKVNHLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSSYNHVLKQR
NAYLKSTDNVDINFLSVLDEQLSDFGTRVIEHRLEFIKQLEEEADRHHSNLSNQIERLKISYESNIPLENNKVIRESFLT
TLKQNHKRDIFKKNTGVGPHRDDLTFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTGEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPDLKTFLVKNGDIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=173684 BSR19_RS10445 WP_013991340.1 2240858..2241958(+) (recF) [Streptococcus salivarius strain ICDC2]
ATGTGGCTCGAAAAAATTGATATTCAACACTTTAGAAATTATACTGAAGCCTCTGTGAGCTTCTCACCTCATCTCAATAT
TTTTCTTGGTCGCAATGCCCAAGGAAAAACAAATATTCTTGAGGCCATCTATTTTCTAGCATTGACACGTAGTCATCGGA
CCCGTTCAGATAAAGAACTGATTCAATTTCAACAAAATACTCTCAAACTTAACGGCATCGTGCATCGTCATAGTGGGAAG
CTACCTCTGGAAATCAGTTTATCTAATAAAGGACGCATAACAAAGGTTAACCACCTCAAACAAGCTAAATTATCCGATTA
TATCGGTCACATGACTGTGGTGCTATTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGCCTGAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTATCTCTCAGACTTATCAAGTTATAATCATGTACTCAAACAACGT
AATGCTTATCTCAAATCTACTGACAATGTAGACATTAATTTCCTCTCAGTGTTAGATGAACAGCTTTCCGATTTTGGAAC
ACGAGTTATCGAACATAGACTAGAATTTATCAAGCAATTAGAGGAGGAGGCAGATAGACATCATAGTAACCTCTCAAATC
AGATAGAGCGCCTTAAAATCTCCTACGAATCTAATATCCCACTGGAAAATAACAAAGTTATTCGCGAATCATTTTTAACC
ACGTTAAAGCAAAATCACAAAAGAGATATCTTCAAAAAGAACACTGGTGTTGGTCCGCATAGGGATGATTTAACATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAGGGGCAGCAACGTAGTCTCATACTTTCTTTAAAAATGGCTGAGATTG
CTCTGATAAAAAAAGTAACAGGTGAATTTCCTATTCTTCTCCTCGATGATGTCATGAGTGAGCTTGACAATCACCGTCAA
CTTAAACTGTTAGAAAGTATTGACGAAGAGGTTCAAACCTTCATGACGACAACTTCACTTGATCATCTGAGTAACCTACC
ACCTGATTTAAAGACCTTCTTAGTTAAGAATGGTGATATTTATGAAAAACAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-343)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.084	97.814	0.637
recF	Bacillus subtilis subsp. subtilis str. 168	44.142	100	0.443