Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | A1D13_RS04855 | Genome accession | NZ_CP014759 |
| Coordinates | 1040686..1041282 (+) | Length | 198 a.a. |
| NCBI ID | WP_027224065.1 | Uniprot ID | A0AAP3HB18 |
| Organism | Legionella pneumophila strain F4468 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1035686..1046282
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A1D13_RS04840 (A1D13_04720) | - | 1037632..1038639 (-) | 1008 | WP_014843598.1 | hypothetical protein | - |
| A1D13_RS04845 (A1D13_04725) | pilM | 1039056..1040120 (+) | 1065 | WP_014843599.1 | type IV pilus assembly protein PilM | Machinery gene |
| A1D13_RS04850 (A1D13_04730) | pilN | 1040124..1040672 (+) | 549 | WP_011213354.1 | PilN domain-containing protein | Machinery gene |
| A1D13_RS04855 (A1D13_04735) | pilO | 1040686..1041282 (+) | 597 | WP_027224065.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| A1D13_RS04860 (A1D13_04740) | pilP | 1041279..1041863 (+) | 585 | WP_014843601.1 | pilus assembly protein PilP | Machinery gene |
| A1D13_RS04865 (A1D13_04745) | pilQ | 1041867..1043963 (+) | 2097 | WP_014843602.1 | type IV pilus secretin PilQ | Machinery gene |
| A1D13_RS04870 (A1D13_04750) | aroK | 1044408..1044935 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| A1D13_RS04875 (A1D13_04755) | aroB | 1044922..1046031 (+) | 1110 | WP_013101269.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 22436.16 Da Isoelectric Point: 5.3369
>NTDB_id=173676 A1D13_RS04855 WP_027224065.1 1040686..1041282(+) (pilO) [Legionella pneumophila strain F4468]
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSGDGKTVSQDELVMAITAKIYRYRAQ
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSGDGKTVSQDELVMAITAKIYRYRAQ
Nucleotide
Download Length: 597 bp
>NTDB_id=173676 A1D13_RS04855 WP_027224065.1 1040686..1041282(+) (pilO) [Legionella pneumophila strain F4468]
ATGGACACGGTCAATTTAAATGAATTAACTCTAGAGAATGTTGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTAATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGCTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTTCCGGCGAAAAATGAAATGCCTGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAGGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGATGGC
TATCACTGCGAAAATATACAGATATCGGGCACAATGA
ATGGACACGGTCAATTTAAATGAATTAACTCTAGAGAATGTTGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTAATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGCTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTTCCGGCGAAAAATGAAATGCCTGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAGGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGATGGC
TATCACTGCGAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
99.497 |
100 |
1 |
| comO | Acinetobacter baylyi ADP1 |
40.526 |
95.96 |
0.389 |