Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BSR19_RS06695 Genome accession   NZ_CP018187
Coordinates   1363724..1364404 (-) Length   226 a.a.
NCBI ID   WP_156246849.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ICDC2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1358724..1369404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR19_RS06675 (BSR19_06750) - 1359278..1359772 (-) 495 WP_037600991.1 YkgJ family cysteine cluster protein -
  BSR19_RS06680 (BSR19_06755) - 1359857..1361857 (-) 2001 WP_156246846.1 ABC transporter permease -
  BSR19_RS06685 (BSR19_06760) - 1361859..1362617 (-) 759 WP_156246847.1 ABC transporter ATP-binding protein -
  BSR19_RS06690 (BSR19_06765) - 1362760..1363734 (-) 975 WP_156246848.1 sensor histidine kinase -
  BSR19_RS06695 (BSR19_06770) braR 1363724..1364404 (-) 681 WP_156246849.1 response regulator transcription factor Regulator
  BSR19_RS06700 (BSR19_06775) - 1364855..1365436 (+) 582 WP_004182304.1 xanthine phosphoribosyltransferase -
  BSR19_RS06705 (BSR19_06780) - 1365436..1366704 (+) 1269 WP_156246850.1 nucleobase:cation symporter-2 family protein -
  BSR19_RS06710 (BSR19_06785) - 1366825..1368393 (-) 1569 WP_156246851.1 ATP-binding cassette domain-containing protein -
  BSR19_RS06715 (BSR19_06790) - 1368523..1369356 (+) 834 WP_073685800.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 226 a.a.        Molecular weight: 26145.37 Da        Isoelectric Point: 4.8947

>NTDB_id=173639 BSR19_RS06695 WP_156246849.1 1363724..1364404(-) (braR) [Streptococcus salivarius strain ICDC2]
MHKILLVEDDEVIRQQVKKILEQWGYEVVLVEDFMEVLSIFVKEEPHLVLMDIGLPLFNGYHWCQEIRKVSKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDQNVLLAKIQGLLRRSYEFGKDQSLLEYRGVILNLKAMDLVYQGEVVSLTKNEFQIL
QVLFERSGNIVSREDLMKELWNSDFFIDDNTLSVNVARLRKKLEAVGLNDFIETKKGVGYGLRHDG

Nucleotide


Download         Length: 681 bp        

>NTDB_id=173639 BSR19_RS06695 WP_156246849.1 1363724..1364404(-) (braR) [Streptococcus salivarius strain ICDC2]
ATGCATAAGATTTTATTAGTTGAGGACGATGAGGTTATCCGTCAACAAGTCAAGAAAATACTAGAACAGTGGGGTTACGA
AGTTGTTCTTGTTGAAGATTTCATGGAAGTATTATCCATTTTTGTAAAAGAAGAACCCCACTTGGTTCTTATGGATATTG
GTTTACCTCTATTTAACGGTTATCACTGGTGTCAGGAAATTCGGAAGGTCTCCAAGGTGCCTATTATGTTCTTGTCTTCT
AGAGATCAGGCCATGGATATCGTTATGGCAATCAATATGGGGGGAGACGACTTTGTGACTAAACCATTTGATCAAAATGT
TCTCCTAGCAAAAATTCAAGGGCTTTTACGTCGTTCTTATGAGTTTGGTAAGGATCAGAGCCTCTTGGAATATAGAGGTG
TGATACTGAACCTCAAAGCCATGGATTTGGTTTATCAGGGCGAAGTCGTTTCTTTGACTAAGAATGAGTTTCAGATTTTA
CAAGTTCTCTTCGAGCGTTCTGGTAATATTGTTAGTCGTGAAGACCTCATGAAGGAGCTTTGGAATAGTGACTTCTTTAT
TGATGATAACACTCTCTCTGTAAATGTGGCACGTTTACGTAAGAAGTTAGAAGCAGTCGGTTTGAATGATTTTATAGAAA
CCAAGAAAGGTGTCGGCTACGGGTTGCGTCATGATGGGTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)

Response regulator receiver domain (Response_reg)

(4-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

52.752

96.46

0.509
  micA Streptococcus pneumoniae Cp1015

35.043

100

0.363

Multiple sequence alignment