Detailed information NTG0173456

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AS588_RS16435
• Genome accession: NZ_CP014700
• Coordinates: 3408587..3409750 (-)
• Length: 387 a.a.
• NCBI ID: WP_015387626.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain S499
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3403587..3414750

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AS588_RS16405 (AS588_16405)	-	3403852..3404271 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
AS588_RS16410 (AS588_16410)	comFC	3404345..3405034 (-)	690	WP_196758106.1	phosphoribosyltransferase family protein	Machinery gene
AS588_RS16415 (AS588_16415)	-	3405040..3405324 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
AS588_RS16420 (AS588_16420)	comFA	3405382..3406767 (-)	1386	WP_015387627.1	DEAD/DEAH box helicase	Machinery gene
AS588_RS16425 (AS588_16425)	-	3406875..3407723 (-)	849	WP_003151387.1	DegV family protein	-
AS588_RS16430 (AS588_16430)	degU	3407821..3408510 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AS588_RS16435 (AS588_16435)	degS	3408587..3409750 (-)	1164	WP_015387626.1	two-component sensor histidine kinase DegS	Regulator
AS588_RS16440 (AS588_16440)	-	3409973..3410620 (+)	648	WP_003151384.1	YigZ family protein	-
AS588_RS16445 (AS588_16445)	-	3410625..3411839 (+)	1215	WP_015387625.1	LCP family protein	-
AS588_RS16450 (AS588_16450)	-	3411929..3413005 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
AS588_RS16455 (AS588_16455)	tuaH	3413138..3414334 (-)	1197	WP_003151381.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 44971.80 Da
• Isoelectric Point: 6.8616

>NTDB_id=173456 AS588_RS16435 WP_015387626.1 3408587..3409750(-) (degS) [Bacillus amyloliquefaciens strain S499]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLLERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=173456 AS588_RS16435 WP_015387626.1 3408587..3409750(-) (degS) [Bacillus amyloliquefaciens strain S499]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCTGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.065	99.483	0.946