Detailed information NTG0173429

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AS588_RS09925
• Genome accession: NZ_CP014700
• Coordinates: 2145669..2146622 (-)
• Length: 317 a.a.
• NCBI ID: WP_003155063.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain S499
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2140669..2151622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AS588_RS09895 (AS588_09895)	-	2140821..2141807 (-)	987	WP_014304782.1	ABC transporter ATP-binding protein	-
AS588_RS09900 (AS588_09900)	-	2141981..2142766 (-)	786	WP_012117278.1	DUF2268 domain-containing protein	-
AS588_RS09905 (AS588_09905)	fabF	2142850..2144088 (-)	1239	WP_003155056.1	beta-ketoacyl-ACP synthase II	-
AS588_RS09910 (AS588_09910)	-	2144111..2145049 (-)	939	WP_003155057.1	beta-ketoacyl-ACP synthase III	-
AS588_RS09915 (AS588_09915)	-	2145217..2145435 (+)	219	WP_003155059.1	hypothetical protein	-
AS588_RS09920 (AS588_09920)	comZ	2145465..2145656 (-)	192	WP_003155061.1	ComZ family protein	Regulator
AS588_RS09925 (AS588_09925)	med	2145669..2146622 (-)	954	WP_003155063.1	BMP family ABC transporter substrate-binding protein	Regulator
AS588_RS09930 (AS588_09930)	-	2146712..2147278 (-)	567	WP_003155065.1	hypothetical protein	-
AS588_RS09935 (AS588_09935)	-	2147361..2148095 (-)	735	WP_015388450.1	hypothetical protein	-
AS588_RS09945 (AS588_09945)	-	2148356..2148541 (+)	186	WP_003155069.1	YjzD family protein	-
AS588_RS09950 (AS588_09950)	-	2148578..2148757 (-)	180	WP_003155070.1	YjzC family protein	-
AS588_RS09955 (AS588_09955)	argF	2148833..2149804 (-)	972	WP_015388451.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35345.94 Da
• Isoelectric Point: 4.5594

>NTDB_id=173429 AS588_RS09925 WP_003155063.1 2145669..2146622(-) (med) [Bacillus amyloliquefaciens strain S499]
MITRLVMIFSVLLLLSGCTQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHDFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=173429 AS588_RS09925 WP_003155063.1 2145669..2146622(-) (med) [Bacillus amyloliquefaciens strain S499]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCACACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTCCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTCGGTGTCATCGCCTCTTTTCTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACGACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCGCTGGTGGACA
AAGCGTTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAATCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785