Detailed information NTG0173368

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: A0O21_RS07605
• Genome accession: NZ_CP014699
• Coordinates: 1639441..1640493 (-)
• Length: 350 a.a.
• NCBI ID: WP_067063807.1
• Uniprot ID: A0A172Q8R8
• Organism: Streptococcus pantholopis strain TA 26
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1634441..1645493

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A0O21_RS07580 (A0O21_07580)	-	1634823..1635677 (-)	855	WP_067063789.1	SDR family NAD(P)-dependent oxidoreductase	-
A0O21_RS07585 (A0O21_07585)	-	1635679..1636515 (-)	837	WP_067063792.1	alpha/beta fold hydrolase	-
A0O21_RS07590 (A0O21_07590)	-	1636534..1637532 (-)	999	WP_067063797.1	NADP-dependent oxidoreductase	-
A0O21_RS07595 (A0O21_07595)	-	1637623..1638048 (-)	426	WP_067063800.1	Rrf2 family transcriptional regulator	-
A0O21_RS07600 (A0O21_07600)	amiF	1638513..1639448 (-)	936	WP_067063803.1	ABC transporter ATP-binding protein	Regulator
A0O21_RS07605 (A0O21_07605)	oppD	1639441..1640493 (-)	1053	WP_067063807.1	ABC transporter ATP-binding protein	Regulator
A0O21_RS07610 (A0O21_07610)	-	1640504..1641535 (-)	1032	WP_067063810.1	ABC transporter permease	-
A0O21_RS07615 (A0O21_07615)	-	1641546..1642460 (-)	915	WP_067065228.1	ABC transporter permease	-
A0O21_RS07620 (A0O21_07620)	-	1642576..1644225 (-)	1650	WP_067063815.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38968.43 Da
• Isoelectric Point: 4.8343

>NTDB_id=173368 A0O21_RS07605 WP_067063807.1 1639441..1640493(-) (oppD) [Streptococcus pantholopis strain TA 26]
MSQETILQVKDLHVNFQTYAGEVQAIRNVNFELKKGETLAIVGESGSGKSVTTRTLIGLSAANAEISGEIDYKGTKLHEL
KEEEWVKIRGNEIAMIFQDPMTSLDPTMKIGKQIAEPMLLHEDISKQEALQRALELMKSVGIPNAEEHINDYPHQWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQAQILNLMKDIQKERKASIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTDTEAGSLRSIPGTPPDLLNPPKGDAFAPRNEFALDIDREEEPPMFKVSESHYAATWLL
DERAPRVKVPAAIAKRWQRWEELKGEKSND

Nucleotide

• Length: 1053 bp

>NTDB_id=173368 A0O21_RS07605 WP_067063807.1 1639441..1640493(-) (oppD) [Streptococcus pantholopis strain TA 26]
ATGAGTCAAGAAACAATTTTACAAGTTAAAGACCTCCATGTGAACTTTCAGACTTATGCCGGAGAGGTCCAAGCAATCCG
AAATGTCAATTTTGAATTGAAAAAAGGCGAAACGCTTGCCATAGTAGGAGAATCAGGGAGTGGGAAGTCAGTAACAACCC
GCACACTTATCGGTTTGTCAGCTGCTAATGCTGAAATTAGCGGTGAGATTGATTATAAAGGAACTAAGCTGCATGAATTA
AAGGAAGAAGAGTGGGTAAAGATTCGGGGCAATGAGATAGCCATGATTTTCCAAGACCCGATGACCAGCCTTGATCCGAC
AATGAAAATCGGTAAGCAGATTGCTGAACCTATGCTGCTCCATGAAGATATTTCTAAACAAGAGGCGCTGCAAAGAGCCC
TTGAACTGATGAAAAGCGTCGGCATTCCTAATGCAGAGGAGCATATCAATGACTATCCGCACCAATGGTCAGGGGGAATG
CGTCAGCGGGCGGTTATTGCTATTGCACTGGCTGCCAATCCCGAAATCCTTATCGCTGATGAACCGACTACAGCATTAGA
CGTAACGATTCAGGCCCAAATTCTTAATTTAATGAAGGACATTCAGAAAGAACGCAAAGCTTCAATTATTTTCATTACCC
ATGACCTCGGTGTAGTTGCCGGAATGGCTGACCGTGTAGCTGTAATGTACGCTGGTAAAATCGTTGAATACGGGACAGTC
GATGAAGTTTTCTACAATCCGCAGCATCCCTACACTTGGGGCTTGCTTAATTCGATGCCGACAACCGATACAGAAGCCGG
AAGTCTCCGGTCTATACCCGGAACACCGCCTGATTTGCTCAATCCTCCTAAGGGAGATGCATTTGCTCCGCGAAATGAAT
TTGCCCTAGATATCGACCGTGAAGAAGAACCGCCGATGTTTAAGGTCTCTGAGTCGCATTATGCAGCTACTTGGTTGCTG
GATGAACGGGCTCCCAGAGTAAAAGTACCGGCAGCTATTGCAAAACGGTGGCAAAGGTGGGAAGAATTGAAGGGAGAAAA
GAGTAATGACTGA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

3D structure

• AlphaFold DB: A0A172Q8R8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.429	100	0.794
amiE	Streptococcus salivarius strain HSISS4	56.287	95.429	0.537
amiE	Streptococcus thermophilus LMG 18311	55.689	95.429	0.531
amiE	Streptococcus thermophilus LMD-9	55.689	95.429	0.531