Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   BSR08_RS06300 Genome accession   NZ_CP018184
Coordinates   1167683..1168300 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain KH2     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1162683..1173300
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR08_RS06270 (BSR08_06365) yndJ 1163002..1164642 (+) 1641 WP_014479931.1 YndJ family protein -
  BSR08_RS06275 (BSR08_06370) - 1164732..1165046 (+) 315 Protein_1236 hypothetical protein -
  BSR08_RS06280 (BSR08_06375) pghL 1165271..1166029 (+) 759 WP_014479934.1 gamma-polyglutamate hydrolase PghL -
  BSR08_RS06285 (BSR08_06380) - 1166056..1166505 (-) 450 WP_014479935.1 YndM family protein -
  BSR08_RS06290 (BSR08_06385) fosM 1166714..1167133 (+) 420 WP_014479937.1 FosM family fosfomycin resistance protein -
  BSR08_RS23330 - 1167057..1167396 (+) 340 Protein_1240 hypothetical protein -
  BSR08_RS06300 (BSR08_06400) dinR/lexA 1167683..1168300 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  BSR08_RS06305 (BSR08_06405) yneA 1168450..1168767 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  BSR08_RS06310 (BSR08_06410) dinL 1168786..1169439 (+) 654 WP_014479938.1 recombinase family protein -
  BSR08_RS06315 (BSR08_06415) ynzC 1169503..1169736 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  BSR08_RS06320 (BSR08_06420) recP/tkt 1169905..1171908 (+) 2004 WP_014476936.1 transketolase Machinery gene
  BSR08_RS06325 (BSR08_06425) sirA 1172061..1172507 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  BSR08_RS06330 (BSR08_06430) yneF 1172593..1172811 (+) 219 WP_003221221.1 YneF family protein -
  BSR08_RS06335 (BSR08_06435) ynzD 1172885..1173058 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=173363 BSR08_RS06300 WP_003238209.1 1167683..1168300(-) (dinR/lexA) [Bacillus subtilis strain KH2]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=173363 BSR08_RS06300 WP_003238209.1 1167683..1168300(-) (dinR/lexA) [Bacillus subtilis strain KH2]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCAATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1