Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   A0O21_RS03690 Genome accession   NZ_CP014699
Coordinates   788570..790321 (+) Length   583 a.a.
NCBI ID   WP_067061467.1    Uniprot ID   A0A172Q6R7
Organism   Streptococcus pantholopis strain TA 26     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 783570..795321
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A0O21_RS03670 (A0O21_03675) gdhA 783798..785147 (+) 1350 WP_067061454.1 NADP-specific glutamate dehydrogenase -
  A0O21_RS03675 (A0O21_03680) - 785312..785758 (+) 447 WP_067061457.1 MarR family winged helix-turn-helix transcriptional regulator -
  A0O21_RS03685 (A0O21_03690) rcrP 786778..788580 (+) 1803 WP_067061463.1 ABC transporter ATP-binding protein Regulator
  A0O21_RS03690 (A0O21_03695) rcrQ 788570..790321 (+) 1752 WP_067061467.1 ABC transporter ATP-binding protein Regulator
  A0O21_RS03695 (A0O21_03700) - 790598..791053 (+) 456 WP_067061471.1 MarR family winged helix-turn-helix transcriptional regulator -
  A0O21_RS03700 (A0O21_03705) - 791046..791681 (+) 636 WP_067061474.1 ABC transporter permease -
  A0O21_RS03705 (A0O21_03710) - 791671..792576 (+) 906 WP_067061477.1 glycine betaine ABC transporter substrate-binding protein -
  A0O21_RS03710 (A0O21_03715) - 792588..793361 (+) 774 WP_067061481.1 ABC transporter ATP-binding protein -
  A0O21_RS03715 (A0O21_03720) - 793354..793995 (+) 642 WP_067061484.1 ABC transporter permease -
  A0O21_RS03720 (A0O21_03725) - 794079..794699 (+) 621 WP_067061487.1 GTP pyrophosphokinase -

Sequence

Protein


Download         Length: 583 a.a.        Molecular weight: 64034.14 Da        Isoelectric Point: 6.4221

>NTDB_id=173347 A0O21_RS03690 WP_067061467.1 788570..790321(+) (rcrQ) [Streptococcus pantholopis strain TA 26]
MVSKKKTSLLSQMAPYTKSYRPAFLLAIAFTVVSSGITVIGPDRLKEITDTITAGLAGQLDLTKIAGISMTLALMYGGGA
VISYSASFIVTTIIQKFSQKMRNAIADKINVLPLRYFDSHPQGDTLSRVTNDVDLMTQSLNQSLVSLVSAVVLLCGSIFM
MIRTNGTMAATAIGSVLIGFVLVVFIMGKTQPFFTRQQNNLAKVNGYVEEIYTGHNVVTSYSAVQQTKNTFNELNQDLYT
SMWKSQFFSGIMMPMMQFIGNFGYVMVCIVGASLAINGDITMGTIVAFMTYVRIFSQPLSQIAQAITQLQSARAAMGRVF
EFLSEDEMTDESSKDKQLTHIKGDVAFKDVFFGYSKDKVIIHDFSAVAKAGQKVAIVGPTGAGKTTIVNLLMKFYEMDKG
SITIDGIAIDQMKREEVHDAFAMVLQDTWLFEGSVKENLIYNQKNITDEQVIAAAKAVGVHHFIMTLPQGYDTLLDDSVS
LSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQG
NHDQLMSADGFYADLYNSQFQAS

Nucleotide


Download         Length: 1752 bp        

>NTDB_id=173347 A0O21_RS03690 WP_067061467.1 788570..790321(+) (rcrQ) [Streptococcus pantholopis strain TA 26]
ATGGTAAGTAAGAAAAAAACCTCTTTATTAAGTCAGATGGCCCCCTATACCAAAAGCTACCGTCCGGCTTTTCTGCTGGC
CATTGCCTTTACAGTTGTTTCGAGCGGAATTACTGTTATTGGCCCCGACAGACTCAAAGAGATTACTGATACAATTACTG
CAGGCTTGGCCGGTCAGCTCGATTTGACTAAAATTGCAGGGATCTCTATGACTTTGGCCCTTATGTACGGGGGCGGTGCT
GTGATTTCTTATTCGGCAAGCTTTATTGTAACCACTATTATTCAGAAATTTTCTCAGAAGATGCGCAATGCGATTGCTGA
TAAGATTAATGTTCTGCCCTTACGTTATTTCGACAGCCATCCTCAGGGAGACACGCTGTCGCGTGTAACCAATGATGTCG
ACTTGATGACTCAGTCTCTTAACCAAAGTCTAGTTTCGCTTGTGTCTGCTGTGGTGCTTTTATGCGGATCAATTTTTATG
ATGATAAGAACAAATGGCACTATGGCTGCGACAGCAATCGGATCAGTCCTAATCGGCTTTGTTCTTGTTGTCTTTATTAT
GGGCAAAACCCAGCCCTTCTTTACCCGCCAGCAAAACAACCTGGCTAAGGTCAACGGCTATGTTGAGGAGATCTATACTG
GCCACAATGTGGTGACGAGTTACAGTGCTGTGCAACAGACAAAAAATACTTTTAATGAACTTAACCAAGACCTATATACT
AGTATGTGGAAGTCACAGTTCTTTTCTGGAATTATGATGCCCATGATGCAGTTTATTGGGAATTTTGGTTATGTTATGGT
TTGTATTGTCGGAGCAAGTCTGGCCATTAACGGTGATATTACGATGGGAACAATCGTCGCTTTTATGACCTATGTCCGTA
TCTTTTCACAACCCTTATCTCAAATTGCTCAGGCGATCACTCAGCTGCAGTCAGCCAGAGCCGCTATGGGCCGTGTCTTT
GAATTCCTTTCAGAAGATGAGATGACTGATGAAAGCTCTAAGGATAAGCAGCTGACACACATTAAAGGGGATGTTGCCTT
TAAGGATGTTTTCTTTGGTTATTCTAAAGATAAGGTCATTATTCATGATTTTTCTGCAGTGGCTAAAGCAGGGCAGAAGG
TGGCCATTGTCGGTCCGACCGGAGCTGGTAAAACAACGATTGTTAATTTGCTGATGAAATTTTATGAAATGGATAAAGGC
AGTATCACAATTGACGGTATTGCTATTGATCAGATGAAACGTGAAGAGGTCCACGATGCCTTTGCTATGGTTTTGCAGGA
TACTTGGCTCTTTGAAGGAAGCGTTAAGGAAAATCTGATTTACAATCAGAAAAATATCACAGATGAGCAAGTTATTGCGG
CGGCTAAAGCTGTCGGTGTTCATCATTTTATTATGACTTTACCGCAGGGTTATGATACCTTGCTTGATGATTCGGTCAGT
CTTTCAGTCGGACAGAAGCAGCTGTTGACTATTGCCCGTGCCTTACTCAAAGATGCGCCGCTTCTCATTCTTGATGAAGC
AACTTCATCGGTAGATACCAGAACAGAAGAGCTGATTCAAAAAGCGATGGATAAGCTGATGGAAGGACGGACTTCCTTTG
TTATTGCACACCGGCTTTCAACAATCCGCAATGCGGACTTGATTTTAGTTATGAAAGACGGCAATATTATCGAACAAGGC
AATCATGATCAGCTGATGTCGGCTGATGGTTTCTATGCCGACCTCTATAACTCCCAGTTTCAAGCTTCCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(25-299)

ABC transporter (ABC_tran)

(363-509)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A172Q6R7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

78.238

99.314

0.777

Multiple sequence alignment