Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | BSF20_RS18690 | Genome accession | NZ_CP018152 |
| Coordinates | 3738101..3739123 (-) | Length | 340 a.a. |
| NCBI ID | WP_003154464.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens strain LM2303 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3733101..3744123
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSF20_RS18660 (BSF20_18295) | - | 3733604..3734485 (-) | 882 | WP_032856768.1 | 2-dehydropantoate 2-reductase | - |
| BSF20_RS18665 (BSF20_18300) | - | 3734648..3735130 (+) | 483 | WP_003154449.1 | N-acetyltransferase | - |
| BSF20_RS18670 (BSF20_18305) | gerR | 3735171..3735746 (-) | 576 | WP_003154450.1 | sporulation-specific transcriptional regulator GerR | - |
| BSF20_RS18675 | rpmF | 3735907..3736086 (-) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| BSF20_RS18680 (BSF20_18310) | - | 3736108..3736626 (-) | 519 | WP_003154459.1 | YceD family protein | - |
| BSF20_RS18685 (BSF20_18315) | - | 3736835..3738082 (+) | 1248 | WP_072588514.1 | nucleotidyltransferase | - |
| BSF20_RS18690 (BSF20_18320) | sepM | 3738101..3739123 (-) | 1023 | WP_003154464.1 | SepM family pheromone-processing serine protease | Regulator |
| BSF20_RS18695 (BSF20_18325) | - | 3739129..3739908 (-) | 780 | WP_015388274.1 | patatin family protein | - |
| BSF20_RS18700 (BSF20_18330) | ylbJ | 3740088..3741314 (+) | 1227 | WP_044053185.1 | sporulation integral membrane protein YlbJ | - |
| BSF20_RS18705 (BSF20_18335) | coaD | 3741333..3741815 (-) | 483 | WP_003154467.1 | pantetheine-phosphate adenylyltransferase | - |
| BSF20_RS18710 (BSF20_18340) | rsmD | 3741820..3742374 (-) | 555 | WP_003154468.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| BSF20_RS18715 (BSF20_18345) | - | 3742374..3742583 (-) | 210 | WP_015388275.1 | hypothetical protein | - |
| BSF20_RS18720 (BSF20_18350) | - | 3742674..3742946 (-) | 273 | WP_003154470.1 | YlbG family protein | - |
| BSF20_RS18725 (BSF20_18355) | ylbF | 3743005..3743454 (-) | 450 | WP_003154472.1 | YlbF family regulator | Regulator |
| BSF20_RS18730 (BSF20_18360) | - | 3743525..3743764 (-) | 240 | WP_003154475.1 | YlbE-like family protein | - |
Sequence
Protein
Download Length: 340 a.a. Molecular weight: 37418.97 Da Isoelectric Point: 7.3848
>NTDB_id=173307 BSF20_RS18690 WP_003154464.1 3738101..3739123(-) (sepM) [Bacillus amyloliquefaciens strain LM2303]
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIFASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIFASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST
Nucleotide
Download Length: 1023 bp
>NTDB_id=173307 BSF20_RS18690 WP_003154464.1 3738101..3739123(-) (sepM) [Bacillus amyloliquefaciens strain LM2303]
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATTGCTGTTACATTTATTAAGCTTCCGTATTA
CATTACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGATGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTTATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGGATTTTCGCCAGCTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGCGTCGCGTTATATACGGACC
GGAACGTGAAAGTGAAGCCGGATCTCCATTTCAGCATTGAAAATATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAGGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATTGCTGTTACATTTATTAAGCTTCCGTATTA
CATTACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGATGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTTATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGGATTTTCGCCAGCTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGCGTCGCGTTATATACGGACC
GGAACGTGAAAGTGAAGCCGGATCTCCATTTCAGCATTGAAAATATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAGGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
38.663 |
100 |
0.391 |