Detailed information NTG0173248

Bioinformatically predicted

Overview

• Name: comQ
• Type: Regulator
• Locus tag: BSF20_RS11650
• Genome accession: NZ_CP018152
• Coordinates: 2238475..2239350 (+)
• Length: 291 a.a.
• NCBI ID: WP_026092320.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain LM2303
• Function: modification of ComX; production of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 2233475..2244350

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSF20_RS11620 (BSF20_11380)	-	2233489..2233887 (+)	399	WP_003152031.1	YueI family protein	-
BSF20_RS11625 (BSF20_11385)	-	2233984..2234535 (+)	552	WP_003152033.1	cysteine hydrolase family protein	-
BSF20_RS11630 (BSF20_11390)	-	2234553..2236019 (+)	1467	WP_014305722.1	nicotinate phosphoribosyltransferase	-
BSF20_RS11635 (BSF20_11395)	-	2236149..2237369 (+)	1221	WP_003152038.1	EAL and HDOD domain-containing protein	-
BSF20_RS11640 (BSF20_11400)	-	2237376..2237717 (-)	342	WP_014305721.1	hypothetical protein	-
BSF20_RS11645 (BSF20_11405)	degQ	2238183..2238323 (+)	141	WP_003152043.1	degradation enzyme regulation protein DegQ	Regulator
BSF20_RS11650 (BSF20_11410)	comQ	2238475..2239350 (+)	876	WP_026092320.1	polyprenyl synthetase family protein	Regulator
BSF20_RS11655 (BSF20_11415)	comX	2239365..2239541 (+)	177	WP_044052947.1	competence pheromone ComX	-
BSF20_RS11660 (BSF20_11420)	-	2239560..2241856 (+)	2297	Protein_2246	histidine kinase	-
BSF20_RS11665 (BSF20_11425)	comA	2241937..2242581 (+)	645	WP_003152052.1	response regulator transcription factor	Regulator
BSF20_RS11670 (BSF20_11430)	-	2242603..2242986 (+)	384	WP_044052949.1	hotdog fold thioesterase	-
BSF20_RS11675 (BSF20_11435)	mnhG	2243026..2243400 (-)	375	WP_003152056.1	monovalent cation/H(+) antiporter subunit G	-
BSF20_RS11680 (BSF20_11440)	-	2243384..2243668 (-)	285	WP_003152057.1	Na(+)/H(+) antiporter subunit F1	-
BSF20_RS11685 (BSF20_11445)	-	2243668..2244144 (-)	477	WP_003152059.1	Na+/H+ antiporter subunit E	-

Sequence

Protein

• Length: 291 a.a.
• Molecular weight: 33443.22 Da
• Isoelectric Point: 4.4649

>NTDB_id=173248 BSF20_RS11650 WP_026092320.1 2238475..2239350(+) (comQ) [Bacillus amyloliquefaciens strain LM2303]
MCLDAETIKEKMKEIVEEKINNPHLKDTLQTFINEKNHFAFGVLAFKHYVAFDGEHYSDITLLASGIELLILAFDIFDDI
EDEDNLDKEWMKIDQSISLNAATSLYSISLQVICELKTNSDFPRLAMKYALNAMQGQHNDLENFPETEDECLQMIKQKSG
SLTAMSAVLGTMLANGEFNEEIENYSYKIGIVKQIENDYYGLFNKNRSDIRKGRKTLILLYLKRRFNAASEKILDLMNAE
ASYHSFLIDNKKSLEDLLFDAGVSQYVSMLIKMYEEEITTSIKDLNIMLEL

Nucleotide

• Length: 876 bp

>NTDB_id=173248 BSF20_RS11650 WP_026092320.1 2238475..2239350(+) (comQ) [Bacillus amyloliquefaciens strain LM2303]
ATGTGTTTAGATGCCGAAACGATTAAAGAGAAGATGAAGGAAATTGTGGAGGAGAAAATAAATAATCCACATTTAAAAGA
CACCCTTCAGACTTTTATAAATGAAAAAAATCATTTTGCTTTTGGTGTTCTTGCATTTAAGCATTATGTGGCTTTCGATG
GTGAGCATTATTCGGATATTACGTTATTAGCTTCAGGAATTGAATTGTTAATTTTAGCTTTTGATATTTTTGACGATATA
GAGGATGAAGATAACTTGGATAAGGAATGGATGAAGATAGATCAATCTATCTCTTTAAATGCAGCCACTTCTCTTTATTC
AATAAGTCTTCAAGTGATTTGTGAGCTTAAAACGAACTCCGATTTTCCCCGGCTTGCTATGAAATATGCTTTAAATGCAA
TGCAAGGTCAGCATAATGACCTCGAAAATTTCCCCGAAACTGAAGACGAATGTCTTCAAATGATTAAACAAAAATCAGGC
TCGCTTACTGCAATGTCAGCTGTATTAGGAACAATGCTTGCAAATGGGGAGTTTAACGAAGAAATTGAGAATTATTCCTA
TAAAATTGGAATTGTTAAACAGATTGAAAATGATTATTATGGTCTTTTTAATAAAAATCGTAGTGATATCAGAAAGGGAA
GAAAAACATTAATTCTGTTGTATCTAAAGCGAAGATTTAATGCTGCTTCAGAAAAAATCTTGGATTTAATGAATGCAGAA
GCAAGTTACCATTCATTCCTCATTGATAATAAAAAAAGCCTTGAAGACCTACTATTTGATGCAGGAGTTAGCCAGTATGT
TTCAATGTTAATTAAAATGTACGAGGAAGAAATTACGACAAGTATAAAAGATTTAAATATAATGTTAGAACTTTAA

Domains

Predicted by InterProScan.

• Polyprenyl synthetase (polyprenyl_synt) (43-236)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comQ	Bacillus subtilis subsp. subtilis str. 168	48.188	94.845	0.457