Detailed information NTG0172944

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: BOC71_RS09900
• Genome accession: NZ_CP018137
• Coordinates: 1803415..1804314 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904848.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain SP61
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1798415..1809314

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BOC71_RS09885 (BOC71_01852)	rsmA	1799065..1799937 (-)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
BOC71_RS12475	-	1800188..1800481 (-)	294	Protein_1804	hypothetical protein	-
BOC71_RS09890 (BOC71_01854)	-	1800474..1801115 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
BOC71_RS09895 (BOC71_01855)	-	1801117..1803147 (-)	2031	WP_000825271.1	bacteriocin-associated integral membrane family protein	-
BOC71_RS09900 (BOC71_01856)	comR	1803415..1804314 (-)	900	WP_000904848.1	helix-turn-helix transcriptional regulator	Regulator
BOC71_RS09905 (BOC71_01857)	rnmV	1804386..1804946 (-)	561	WP_000660013.1	ribonuclease M5	-
BOC71_RS09910 (BOC71_01858)	-	1804946..1805719 (-)	774	WP_000575650.1	TatD family hydrolase	-
BOC71_RS09920 (BOC71_01859)	-	1806024..1806995 (-)	972	Protein_1810	DUF1542 domain-containing protein	-
BOC71_RS09925 (BOC71_01860)	rpmH	1807201..1807335 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
BOC71_RS09930 (BOC71_01861)	-	1807480..1808694 (-)	1215	WP_000666484.1	pyridoxal phosphate-dependent aminotransferase	-
BOC71_RS09935 (BOC71_01862)	-	1808850..1809142 (-)	293	Protein_1813	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35420.14 Da
• Isoelectric Point: 4.6674

>NTDB_id=172944 BOC71_RS09900 WP_000904848.1 1803415..1804314(-) (comR) [Streptococcus pneumoniae strain SP61]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPPAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEELMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=172944 BOC71_RS09900 WP_000904848.1 1803415..1804314(-) (comR) [Streptococcus pneumoniae strain SP61]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTCCTGCTTATTTAGAATTGAAATATCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAGAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus pyogenes MGAS8232	36.577	99.666	0.365
comR	Streptococcus pyogenes MGAS315	36	100	0.361
comR	Streptococcus suis P1/7	37.113	97.324	0.361
comR	Streptococcus suis 05ZYH33	37.113	97.324	0.361