Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | VVCECT4999_RS03200 | Genome accession | NZ_CP014636 |
| Coordinates | 635034..635651 (-) | Length | 205 a.a. |
| NCBI ID | WP_011079558.1 | Uniprot ID | Q7MHU7 |
| Organism | Vibrio vulnificus strain CECT 4999 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 630034..640651
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VVCECT4999_RS03190 (VVCECT4999_03155) | aceF | 631295..633217 (+) | 1923 | WP_039448914.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| VVCECT4999_RS03195 (VVCECT4999_03160) | lpdA | 633475..634902 (+) | 1428 | WP_011079557.1 | dihydrolipoyl dehydrogenase | - |
| VVCECT4999_RS03200 (VVCECT4999_03165) | opaR | 635034..635651 (-) | 618 | WP_011079558.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| VVCECT4999_RS03205 (VVCECT4999_03170) | hpt | 636043..636573 (+) | 531 | WP_011079559.1 | hypoxanthine phosphoribosyltransferase | - |
| VVCECT4999_RS03210 (VVCECT4999_03175) | can | 636672..637340 (-) | 669 | WP_026060803.1 | carbonate dehydratase | - |
| VVCECT4999_RS03215 (VVCECT4999_03180) | - | 637582..639252 (+) | 1671 | WP_039448912.1 | SulP family inorganic anion transporter | - |
| VVCECT4999_RS03220 (VVCECT4999_03185) | - | 639420..640343 (+) | 924 | WP_039448910.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23717.02 Da Isoelectric Point: 6.1461
>NTDB_id=172857 VVCECT4999_RS03200 WP_011079558.1 635034..635651(-) (opaR) [Vibrio vulnificus strain CECT 4999]
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHAKENIANITNAMIELVVQDNHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHNPE
DLANLFHGICYSLFVQANRTNNTAELSKLVSSYLDMLCIYKREHE
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHAKENIANITNAMIELVVQDNHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHNPE
DLANLFHGICYSLFVQANRTNNTAELSKLVSSYLDMLCIYKREHE
Nucleotide
Download Length: 618 bp
>NTDB_id=172857 VVCECT4999_RS03200 WP_011079558.1 635034..635651(-) (opaR) [Vibrio vulnificus strain CECT 4999]
ATGGACTCAATCGCAAAGAGACCGCGAACTCGCTTATCTCCGCTAAAACGTAAACAGCAGCTCATGGAAATTGCACTGGA
AGTGTTTGCTCGTCGTGGCATTGGCCGCGGTGGTCACGCAGACATCGCTGAAATTGCGCAAGTTTCTGTGGCGACCGTCT
TCAACTACTTCCCAACTCGCGAAGATCTTGTAGACGAAGTGCTTAATCATGTCGTTCGTCAGTTTTCTAATTTCCTATCT
GACAACATCGATTTGGATCTTCACGCTAAAGAAAACATCGCCAACATCACCAACGCAATGATTGAGCTTGTGGTGCAAGA
CAATCACTGGTTGAAAGTTTGGTTCGAGTGGAGTGCGTCGACGCGTGACGAAGTTTGGCCTCTGTTTGTCACCACCAACC
GTACTAATCAGTTGCTGGTACAAAACATGTTCATCAAAGCCATTGAACGCGGTGAAGTGTGTGATCAACACAACCCAGAA
GATTTGGCAAACCTGTTCCACGGCATTTGTTACTCGCTGTTTGTTCAAGCAAACCGCACCAACAATACTGCAGAGCTGAG
CAAACTGGTCAGCAGCTACTTAGACATGCTATGCATCTATAAACGCGAACACGAATAG
ATGGACTCAATCGCAAAGAGACCGCGAACTCGCTTATCTCCGCTAAAACGTAAACAGCAGCTCATGGAAATTGCACTGGA
AGTGTTTGCTCGTCGTGGCATTGGCCGCGGTGGTCACGCAGACATCGCTGAAATTGCGCAAGTTTCTGTGGCGACCGTCT
TCAACTACTTCCCAACTCGCGAAGATCTTGTAGACGAAGTGCTTAATCATGTCGTTCGTCAGTTTTCTAATTTCCTATCT
GACAACATCGATTTGGATCTTCACGCTAAAGAAAACATCGCCAACATCACCAACGCAATGATTGAGCTTGTGGTGCAAGA
CAATCACTGGTTGAAAGTTTGGTTCGAGTGGAGTGCGTCGACGCGTGACGAAGTTTGGCCTCTGTTTGTCACCACCAACC
GTACTAATCAGTTGCTGGTACAAAACATGTTCATCAAAGCCATTGAACGCGGTGAAGTGTGTGATCAACACAACCCAGAA
GATTTGGCAAACCTGTTCCACGGCATTTGTTACTCGCTGTTTGTTCAAGCAAACCGCACCAACAATACTGCAGAGCTGAG
CAAACTGGTCAGCAGCTACTTAGACATGCTATGCATCTATAAACGCGAACACGAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
92.157 |
99.512 |
0.917 |
| hapR | Vibrio cholerae C6706 |
72.864 |
97.073 |
0.707 |
| hapR | Vibrio cholerae strain A1552 |
72.864 |
97.073 |
0.707 |