Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   AZE34_RS09590 Genome accession   NZ_CP014567
Coordinates   1945087..1946121 (+) Length   344 a.a.
NCBI ID   WP_017175228.1    Uniprot ID   A0A4V2KX37
Organism   Staphylococcus hominis strain C34847     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1940087..1951121
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AZE34_RS09560 (AZE34_09360) - 1940625..1941344 (+) 720 WP_017175233.1 type 1 glutamine amidotransferase -
  AZE34_RS09565 (AZE34_09365) - 1941389..1942378 (-) 990 WP_017175232.1 FUSC family protein -
  AZE34_RS09570 (AZE34_09370) map 1942552..1943304 (+) 753 WP_017175231.1 type I methionyl aminopeptidase -
  AZE34_RS09580 (AZE34_09375) - 1943981..1944367 (+) 387 WP_017175230.1 hypothetical protein -
  AZE34_RS09585 (AZE34_09380) liaF 1944389..1945090 (+) 702 WP_017175229.1 cell wall-active antibiotics response protein LiaF -
  AZE34_RS09590 (AZE34_09385) vraS 1945087..1946121 (+) 1035 WP_017175228.1 sensor histidine kinase Regulator
  AZE34_RS09595 (AZE34_09390) vraR 1946123..1946752 (+) 630 WP_002450048.1 two-component system response regulator VraR Regulator
  AZE34_RS09600 (AZE34_09395) - 1946831..1948033 (-) 1203 WP_017175227.1 YihY/virulence factor BrkB family protein -
  AZE34_RS09605 (AZE34_09400) - 1948125..1948406 (-) 282 WP_002450075.1 hypothetical protein -
  AZE34_RS09610 (AZE34_09405) - 1948412..1948876 (-) 465 WP_017175226.1 low molecular weight protein-tyrosine-phosphatase -
  AZE34_RS09615 (AZE34_09410) - 1949018..1949224 (+) 207 WP_002450082.1 DUF1128 domain-containing protein -
  AZE34_RS09620 (AZE34_09415) - 1949236..1950483 (+) 1248 WP_017175225.1 aminopeptidase -
  AZE34_RS09625 (AZE34_09420) - 1950516..1951049 (+) 534 WP_017175224.1 acyl-CoA thioesterase -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 39716.26 Da        Isoelectric Point: 5.8932

>NTDB_id=172519 AZE34_RS09590 WP_017175228.1 1945087..1946121(+) (vraS) [Staphylococcus hominis strain C34847]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSVLAYKINQQNDWIKN
QIEHAIEGETVGINDKNIELYNETIDIYQMLVPLNQELQRLRIKTQNLTNENYNMNDIKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETELEPPLNQQIPVLEKMIQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIYDI
QDFKVPKGIEDHLFRITQEAISNTLRHSDGTKVTVELFNHQDYLLLRIQDNGKGFNVDEKVEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLTKEEG

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=172519 AZE34_RS09590 WP_017175228.1 1945087..1946121(+) (vraS) [Staphylococcus hominis strain C34847]
ATGAATCACTATTTAAGAGCAATAGGATCCATGCTTATTTTAGTGTATAGCATGCTAACTGCGTTTTTATTTATAGATAA
AGTTTTTGTAAATATTATATATTTTCAAGGAATGTTCTATACTCAAATATTTGGTATACCTGTGTTTCTATTTCTTAATT
TAGTGATTATTTTACTTTGTATTATCGTTGGCTCTGTATTAGCTTATAAAATAAATCAGCAAAATGATTGGATAAAGAAT
CAAATTGAACACGCCATTGAAGGTGAAACGGTAGGTATTAATGATAAAAACATAGAACTATATAATGAAACAATTGATAT
TTATCAAATGTTAGTGCCTTTAAATCAAGAATTACAGCGATTAAGAATCAAAACTCAAAATTTAACAAATGAAAACTACA
ATATGAATGACATTAAAGTAAAAAAAATTATAGAAGATGAGCGTCAGCGTTTAGCAAGGGAATTACACGATTCAGTAAGT
CAACAACTTTTCGCAGCAAGTATGATGTTATCAGCGATAAAAGAAACAGAACTAGAACCACCCCTTAACCAACAAATTCC
AGTACTTGAGAAAATGATACAAGAATCTCAATTAGAGATGCGAGCGCTGTTACTACATTTGCGACCTTTAGGACTCAAGG
ATAAATCATTAGGGGAAGGTATTAAAGATTTAGTCATTGATTTACAAAAGAAAGTACCTATGAAAGTCATTTATGATATA
CAAGATTTTAAAGTGCCTAAAGGAATTGAAGATCATCTATTTCGAATTACACAAGAGGCAATTTCAAATACATTAAGACA
TTCTGATGGAACTAAAGTGACAGTCGAATTATTTAATCATCAAGATTATTTATTATTAAGAATTCAAGATAATGGTAAAG
GCTTTAACGTAGATGAAAAAGTAGAACAAAGTTATGGATTGAAAAATATGAGAGAACGTGCATTAGAAATAGGTGCAACG
TTTCATATCGTATCTCTACCAGATTCAGGAACTAGAATAGAGGTAAAAGCACCTTTAACGAAAGAGGAGGGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4V2KX37

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

89.826

100

0.898


Multiple sequence alignment