Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AZE34_RS09030 | Genome accession | NZ_CP014567 |
| Coordinates | 1834821..1835216 (+) | Length | 131 a.a. |
| NCBI ID | WP_017175139.1 | Uniprot ID | - |
| Organism | Staphylococcus hominis strain C34847 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1829821..1840216
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AZE34_RS09000 (AZE34_08815) | atpD | 1829921..1831333 (+) | 1413 | WP_017175135.1 | F0F1 ATP synthase subunit beta | - |
| AZE34_RS09005 (AZE34_08820) | - | 1831355..1831756 (+) | 402 | WP_002448708.1 | F0F1 ATP synthase subunit epsilon | - |
| AZE34_RS09010 (AZE34_08825) | - | 1832070..1832300 (+) | 231 | WP_017175136.1 | DUF1146 family protein | - |
| AZE34_RS09015 (AZE34_08830) | murA | 1832407..1833672 (+) | 1266 | WP_017175137.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| AZE34_RS09020 (AZE34_08835) | fabZ | 1833700..1834137 (+) | 438 | WP_002448673.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AZE34_RS09025 (AZE34_08840) | - | 1834187..1834627 (-) | 441 | WP_017175138.1 | YwpF-like family protein | - |
| AZE34_RS09030 (AZE34_08845) | ssb | 1834821..1835216 (+) | 396 | WP_017175139.1 | single-stranded DNA-binding protein | Machinery gene |
| AZE34_RS09035 (AZE34_08850) | - | 1835620..1836366 (+) | 747 | WP_017175140.1 | transglycosylase family protein | - |
| AZE34_RS09040 (AZE34_08855) | tenA | 1836758..1837447 (+) | 690 | WP_017175141.1 | thiaminase II | - |
| AZE34_RS09045 (AZE34_08860) | thiD | 1837440..1838261 (+) | 822 | WP_017175142.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AZE34_RS09050 (AZE34_08865) | thiM | 1838254..1839042 (+) | 789 | WP_017175143.1 | hydroxyethylthiazole kinase | - |
| AZE34_RS09055 (AZE34_08870) | thiE | 1839045..1839683 (+) | 639 | WP_017175144.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15148.29 Da Isoelectric Point: 5.9389
>NTDB_id=172517 AZE34_RS09030 WP_017175139.1 1834821..1835216(+) (ssb) [Staphylococcus hominis strain C34847]
MLNKIVIVGRMTKDAKIYDNEEVKIATFSVATERNYKDENDEIACDYIFCKAFGKMASNIEKYTSQGSLVGITGQMRSRK
YEKEKQTHFVTELYVETIKFMSPKLNNEKLSDSSLNTDTYPFDNLELMNIK
MLNKIVIVGRMTKDAKIYDNEEVKIATFSVATERNYKDENDEIACDYIFCKAFGKMASNIEKYTSQGSLVGITGQMRSRK
YEKEKQTHFVTELYVETIKFMSPKLNNEKLSDSSLNTDTYPFDNLELMNIK
Nucleotide
Download Length: 396 bp
>NTDB_id=172517 AZE34_RS09030 WP_017175139.1 1834821..1835216(+) (ssb) [Staphylococcus hominis strain C34847]
ATGTTAAATAAGATAGTAATCGTTGGTCGTATGACTAAAGATGCAAAAATTTATGATAATGAGGAGGTGAAAATCGCAAC
GTTTAGTGTGGCTACTGAACGTAATTATAAAGATGAAAATGATGAAATAGCGTGTGATTATATATTTTGTAAAGCATTTG
GTAAGATGGCCAGCAACATTGAAAAATATACTTCTCAAGGATCTTTAGTAGGTATTACTGGCCAAATGCGTTCTCGTAAA
TATGAAAAGGAAAAACAAACTCACTTTGTCACAGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATTAAATAA
TGAAAAACTCTCAGATAGCTCACTAAATACAGACACTTATCCATTTGATAATCTCGAATTAATGAATATAAAATAA
ATGTTAAATAAGATAGTAATCGTTGGTCGTATGACTAAAGATGCAAAAATTTATGATAATGAGGAGGTGAAAATCGCAAC
GTTTAGTGTGGCTACTGAACGTAATTATAAAGATGAAAATGATGAAATAGCGTGTGATTATATATTTTGTAAAGCATTTG
GTAAGATGGCCAGCAACATTGAAAAATATACTTCTCAAGGATCTTTAGTAGGTATTACTGGCCAAATGCGTTCTCGTAAA
TATGAAAAGGAAAAACAAACTCACTTTGTCACAGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATTAAATAA
TGAAAAACTCTCAGATAGCTCACTAAATACAGACACTTATCCATTTGATAATCTCGAATTAATGAATATAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
75.573 |
100 |
0.756 |
| ssb | Staphylococcus aureus MW2 |
74.809 |
100 |
0.748 |