Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | AYR69_RS16775 | Genome accession | NZ_CP014540 |
| Coordinates | 3515675..3516148 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214065.1 | Uniprot ID | N9K1Q3 |
| Organism | Acinetobacter baumannii strain XH857 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3510675..3521148
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYR69_RS16760 (AYR69_16760) | pilX | 3513304..3514122 (-) | 819 | WP_000149376.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| AYR69_RS16765 (AYR69_16765) | pilW | 3514119..3515120 (-) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| AYR69_RS16770 (AYR69_16770) | pilV | 3515121..3515681 (-) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| AYR69_RS16775 (AYR69_16775) | fimU | 3515675..3516148 (-) | 474 | WP_001214065.1 | pilus assembly FimT family protein | Machinery gene |
| AYR69_RS16780 (AYR69_16780) | ispH | 3516318..3517268 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| AYR69_RS16785 (AYR69_16785) | gmk | 3517391..3518020 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| AYR69_RS16790 (AYR69_16790) | rpoZ | 3518093..3518371 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| AYR69_RS19190 | - | 3518410..3518540 (+) | 131 | Protein_3294 | hypothetical protein | - |
| AYR69_RS16795 (AYR69_16795) | - | 3518580..3520685 (+) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16837.43 Da Isoelectric Point: 8.5355
>NTDB_id=172317 AYR69_RS16775 WP_001214065.1 3515675..3516148(-) (fimU) [Acinetobacter baumannii strain XH857]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=172317 AYR69_RS16775 WP_001214065.1 3515675..3516148(-) (fimU) [Acinetobacter baumannii strain XH857]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGCCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGCCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |