Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | AZE33_RS18280 | Genome accession | NZ_CP014528 |
| Coordinates | 3788696..3789169 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214068.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain XH858 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3783696..3794169
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AZE33_RS18265 (AZE33_18265) | pilX | 3786325..3787143 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| AZE33_RS18270 (AZE33_18270) | pilW | 3787140..3788141 (-) | 1002 | WP_000079199.1 | PilW family protein | Machinery gene |
| AZE33_RS18275 (AZE33_18275) | pilV | 3788142..3788702 (-) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| AZE33_RS18280 (AZE33_18280) | fimU | 3788696..3789169 (-) | 474 | WP_001214068.1 | pilus assembly FimT family protein | Machinery gene |
| AZE33_RS18285 (AZE33_18285) | ispH | 3789339..3790289 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| AZE33_RS18290 (AZE33_18290) | gmk | 3790412..3791041 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| AZE33_RS18295 (AZE33_18295) | rpoZ | 3791114..3791392 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| AZE33_RS20760 | - | 3791431..3791561 (+) | 131 | Protein_3601 | hypothetical protein | - |
| AZE33_RS18300 (AZE33_18300) | - | 3791601..3793706 (+) | 2106 | WP_020753492.1 | RelA/SpoT family protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16851.46 Da Isoelectric Point: 8.5355
>NTDB_id=172115 AZE33_RS18280 WP_001214068.1 3788696..3789169(-) (fimU) [Acinetobacter baumannii strain XH858]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLEANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLEANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=172115 AZE33_RS18280 WP_001214068.1 3788696..3789169(-) (fimU) [Acinetobacter baumannii strain XH858]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGAGGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAATTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGACGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTTATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGAGGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAATTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGACGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTTATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |