Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AYJ52_RS13480 | Genome accession | NZ_CP014477 |
| Coordinates | 2885656..2886036 (+) | Length | 126 a.a. |
| NCBI ID | WP_002121425.1 | Uniprot ID | A0A009HD22 |
| Organism | Acinetobacter pittii strain AP_882 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2880656..2891036
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYJ52_RS13450 (AYJ52_13450) | kdsB | 2881562..2882323 (+) | 762 | WP_017386826.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| AYJ52_RS13455 (AYJ52_13455) | holB | 2882337..2883317 (+) | 981 | WP_017386827.1 | DNA polymerase III subunit delta' | - |
| AYJ52_RS13460 (AYJ52_13460) | pilZ | 2883328..2883669 (+) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| AYJ52_RS13465 (AYJ52_13465) | ycfH | 2883687..2884460 (+) | 774 | WP_017386828.1 | TatD family hydrolase | - |
| AYJ52_RS13470 (AYJ52_13470) | - | 2884497..2885105 (+) | 609 | WP_014206595.1 | TetR/AcrR family transcriptional regulator | - |
| AYJ52_RS13475 (AYJ52_13475) | - | 2885112..2885666 (+) | 555 | WP_002121405.1 | type II secretion system protein | - |
| AYJ52_RS13480 (AYJ52_13480) | xcpV | 2885656..2886036 (+) | 381 | WP_002121425.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AYJ52_RS13485 (AYJ52_13485) | xcpW | 2886036..2886791 (+) | 756 | WP_017386829.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AYJ52_RS13490 (AYJ52_13490) | gspK | 2886792..2887751 (+) | 960 | WP_017386830.1 | type II secretion system minor pseudopilin GspK | - |
| AYJ52_RS13495 (AYJ52_13495) | - | 2887980..2888576 (+) | 597 | WP_017386831.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| AYJ52_RS13500 (AYJ52_13500) | ung | 2888630..2889343 (+) | 714 | WP_005069527.1 | uracil-DNA glycosylase | - |
| AYJ52_RS13505 (AYJ52_13505) | hibch | 2889340..2890464 (+) | 1125 | WP_014206599.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AYJ52_RS13510 (AYJ52_13510) | tadA | 2890470..2890973 (+) | 504 | WP_002121378.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13976.17 Da Isoelectric Point: 9.4463
>NTDB_id=171859 AYJ52_RS13480 WP_002121425.1 2885656..2886036(+) (xcpV) [Acinetobacter pittii strain AP_882]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=171859 AYJ52_RS13480 WP_002121425.1 2885656..2886036(+) (xcpV) [Acinetobacter pittii strain AP_882]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTAGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACCAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTTGATTTGCAAATTAGCTTATATGATTCTGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTGTTTTTTAATTATCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTAGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACCAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTTGATTTGCAAATTAGCTTATATGATTCTGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTGTTTTTTAATTATCCAATGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
93.651 |
100 |
0.937 |