Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   BKN48_RS19650 Genome accession   NZ_CP017676
Coordinates   3802379..3802996 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain VV2     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3797379..3807996
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKN48_RS19620 (BKN48_19620) yndJ 3797693..3799333 (+) 1641 WP_070549062.1 YndJ family protein -
  BKN48_RS19625 (BKN48_19625) - 3799423..3799737 (+) 315 WP_172849938.1 hypothetical protein -
  BKN48_RS19630 (BKN48_19630) pghL 3799961..3800719 (+) 759 WP_021479204.1 gamma-polyglutamate hydrolase PghL -
  BKN48_RS19635 (BKN48_19635) - 3800746..3801195 (-) 450 WP_003245454.1 YndM family protein -
  BKN48_RS19640 (BKN48_19640) fosM 3801406..3801840 (+) 435 WP_070549066.1 FosM family fosfomycin resistance protein -
  BKN48_RS21620 - 3801749..3802007 (+) 259 Protein_3831 hypothetical protein -
  BKN48_RS19650 (BKN48_19650) dinR/lexA 3802379..3802996 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  BKN48_RS19655 (BKN48_19655) yneA 3803146..3803463 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  BKN48_RS19660 (BKN48_19660) dinL 3803482..3804135 (+) 654 WP_003231596.1 YneB family resolvase-like protein -
  BKN48_RS19665 (BKN48_19665) ynzC 3804199..3804432 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  BKN48_RS19670 (BKN48_19670) recP/tkt 3804601..3806604 (+) 2004 WP_003231593.1 transketolase Machinery gene
  BKN48_RS19675 (BKN48_19675) sirA 3806757..3807203 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  BKN48_RS19680 (BKN48_19680) yneF 3807289..3807507 (+) 219 WP_003221221.1 YneF family protein -
  BKN48_RS19685 (BKN48_19685) ynzD 3807581..3807754 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=170705 BKN48_RS19650 WP_003238209.1 3802379..3802996(-) (dinR/lexA) [Bacillus subtilis strain VV2]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=170705 BKN48_RS19650 WP_003238209.1 3802379..3802996(-) (dinR/lexA) [Bacillus subtilis strain VV2]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTCGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCAGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACTGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACACACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment