Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | GT3570_RS11820 | Genome accession | NZ_CP014335 |
| Coordinates | 2343410..2344483 (-) | Length | 357 a.a. |
| NCBI ID | WP_021322348.1 | Uniprot ID | - |
| Organism | Geobacillus thermoleovorans strain KCTC 3570 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2338410..2349483
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GT3570_RS11780 (GT3570_11780) | - | 2339138..2339932 (+) | 795 | WP_011231909.1 | YqhG family protein | - |
| GT3570_RS11785 (GT3570_11785) | - | 2340035..2340214 (-) | 180 | WP_011231910.1 | YqzE family protein | - |
| GT3570_RS11790 (GT3570_11790) | comGG | 2340260..2340649 (-) | 390 | WP_011231911.1 | competence type IV pilus minor pilin ComGG | - |
| GT3570_RS11795 (GT3570_11795) | comGF | 2340724..2341170 (-) | 447 | WP_021322351.1 | competence type IV pilus minor pilin ComGF | - |
| GT3570_RS11800 (GT3570_11800) | - | 2341149..2341475 (-) | 327 | WP_021322350.1 | type II secretion system protein | - |
| GT3570_RS11805 (GT3570_11805) | comGD | 2341459..2341896 (-) | 438 | WP_011231914.1 | competence type IV pilus minor pilin ComGD | - |
| GT3570_RS11810 (GT3570_11810) | comGC | 2341886..2342182 (-) | 297 | WP_011231915.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GT3570_RS11815 (GT3570_11815) | comGB | 2342385..2343413 (-) | 1029 | WP_047758066.1 | competence type IV pilus assembly protein ComGB | - |
| GT3570_RS11820 (GT3570_11820) | comGA | 2343410..2344483 (-) | 1074 | WP_021322348.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GT3570_RS11825 (GT3570_11825) | - | 2344676..2345374 (+) | 699 | WP_011231918.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GT3570_RS11830 (GT3570_11830) | - | 2345533..2345775 (+) | 243 | WP_008879854.1 | DUF2626 family protein | - |
| GT3570_RS11835 (GT3570_11835) | - | 2345859..2346992 (-) | 1134 | WP_062899112.1 | class I SAM-dependent methyltransferase | - |
| GT3570_RS11840 (GT3570_11840) | - | 2347314..2347946 (-) | 633 | WP_014196343.1 | MBL fold metallo-hydrolase | - |
| GT3570_RS18055 | - | 2348116..2348292 (+) | 177 | WP_011231921.1 | DUF2759 domain-containing protein | - |
Sequence
Protein
Download Length: 357 a.a. Molecular weight: 39535.99 Da Isoelectric Point: 8.7901
>NTDB_id=170407 GT3570_RS11820 WP_021322348.1 2343410..2344483(-) (comGA) [Geobacillus thermoleovorans strain KCTC 3570]
MLNEIEQTANRLLAEAVQRRASDLHLVPRRRDAAVRLRLDGMLVDVGVLSKETAERLIAHFKFLAGMDIGERRRPQSGAM
EVAEFGETVYLRLSTLPTLYDESLVIRLLPQRLSLPLRELSLFFRSTARLFSFMQHPQGLVLLTGPTGSGKTTTLYTLLD
LCQAERQRNIITLEDPIEKQNERLLQVQINEKAGITYAAGLKAALRHDPDVLMVGEIRDHDTAAIAIRSALSGHLVVSTM
HAADAVGAVYRLHEFGIPLGDLAETLLAVSAQRLVELCCPLCGDDCHPSCGRLGRRRRTAVYELLCGSALEDVIRSLSNG
RGKPKRSYMTLARLIRKGIALGYLPVRMLELVGGGER
MLNEIEQTANRLLAEAVQRRASDLHLVPRRRDAAVRLRLDGMLVDVGVLSKETAERLIAHFKFLAGMDIGERRRPQSGAM
EVAEFGETVYLRLSTLPTLYDESLVIRLLPQRLSLPLRELSLFFRSTARLFSFMQHPQGLVLLTGPTGSGKTTTLYTLLD
LCQAERQRNIITLEDPIEKQNERLLQVQINEKAGITYAAGLKAALRHDPDVLMVGEIRDHDTAAIAIRSALSGHLVVSTM
HAADAVGAVYRLHEFGIPLGDLAETLLAVSAQRLVELCCPLCGDDCHPSCGRLGRRRRTAVYELLCGSALEDVIRSLSNG
RGKPKRSYMTLARLIRKGIALGYLPVRMLELVGGGER
Nucleotide
Download Length: 1074 bp
>NTDB_id=170407 GT3570_RS11820 WP_021322348.1 2343410..2344483(-) (comGA) [Geobacillus thermoleovorans strain KCTC 3570]
GTGCTGAACGAGATCGAACAAACGGCAAACCGCCTTCTCGCCGAAGCGGTGCAGCGCCGCGCCTCGGATCTTCACCTCGT
TCCGCGCCGCCGCGATGCCGCTGTTCGTCTTCGGCTTGATGGCATGCTTGTCGACGTTGGCGTGCTTTCGAAGGAAACGG
CGGAACGTCTCATCGCCCACTTTAAATTTTTAGCCGGCATGGACATCGGGGAACGACGCCGTCCGCAAAGCGGCGCCATG
GAAGTGGCTGAGTTTGGGGAAACGGTGTATTTGCGTTTATCGACATTGCCGACGCTCTACGATGAAAGCCTCGTCATTCG
GCTTCTGCCGCAGCGCCTCTCGCTGCCGCTTCGCGAACTATCTTTATTCTTCCGCTCCACCGCACGATTATTTTCCTTCA
TGCAGCATCCGCAAGGGCTTGTGCTGTTGACCGGCCCGACGGGGTCGGGAAAAACGACGACCCTCTACACCCTTCTTGAT
CTTTGCCAAGCTGAAAGGCAACGCAACATCATCACGCTTGAAGATCCGATCGAAAAACAGAACGAACGATTGTTGCAAGT
GCAAATCAATGAAAAAGCAGGCATCACATACGCCGCCGGGTTAAAAGCGGCGCTGCGCCATGACCCGGATGTGTTGATGG
TCGGCGAGATCCGCGATCATGATACGGCGGCCATTGCCATCCGTTCAGCGTTGAGCGGCCATTTGGTCGTCTCGACGATG
CACGCCGCCGATGCAGTCGGCGCCGTCTACCGGCTGCATGAATTCGGCATTCCGCTCGGCGATTTGGCCGAGACGCTGCT
TGCCGTCTCTGCCCAGCGGCTTGTCGAGCTTTGCTGCCCGCTGTGCGGCGACGATTGCCATCCATCGTGCGGCCGTCTTG
GACGACGCCGGCGCACGGCTGTTTATGAGTTGCTTTGCGGTTCAGCGCTGGAGGACGTGATTCGTTCCCTCTCCAATGGG
AGAGGGAAGCCAAAGCGCTCTTATATGACGCTGGCGCGCTTGATCCGCAAGGGGATTGCGCTCGGCTACCTGCCCGTTCG
CATGCTTGAGCTCGTCGGAGGGGGAGAAAGATGA
GTGCTGAACGAGATCGAACAAACGGCAAACCGCCTTCTCGCCGAAGCGGTGCAGCGCCGCGCCTCGGATCTTCACCTCGT
TCCGCGCCGCCGCGATGCCGCTGTTCGTCTTCGGCTTGATGGCATGCTTGTCGACGTTGGCGTGCTTTCGAAGGAAACGG
CGGAACGTCTCATCGCCCACTTTAAATTTTTAGCCGGCATGGACATCGGGGAACGACGCCGTCCGCAAAGCGGCGCCATG
GAAGTGGCTGAGTTTGGGGAAACGGTGTATTTGCGTTTATCGACATTGCCGACGCTCTACGATGAAAGCCTCGTCATTCG
GCTTCTGCCGCAGCGCCTCTCGCTGCCGCTTCGCGAACTATCTTTATTCTTCCGCTCCACCGCACGATTATTTTCCTTCA
TGCAGCATCCGCAAGGGCTTGTGCTGTTGACCGGCCCGACGGGGTCGGGAAAAACGACGACCCTCTACACCCTTCTTGAT
CTTTGCCAAGCTGAAAGGCAACGCAACATCATCACGCTTGAAGATCCGATCGAAAAACAGAACGAACGATTGTTGCAAGT
GCAAATCAATGAAAAAGCAGGCATCACATACGCCGCCGGGTTAAAAGCGGCGCTGCGCCATGACCCGGATGTGTTGATGG
TCGGCGAGATCCGCGATCATGATACGGCGGCCATTGCCATCCGTTCAGCGTTGAGCGGCCATTTGGTCGTCTCGACGATG
CACGCCGCCGATGCAGTCGGCGCCGTCTACCGGCTGCATGAATTCGGCATTCCGCTCGGCGATTTGGCCGAGACGCTGCT
TGCCGTCTCTGCCCAGCGGCTTGTCGAGCTTTGCTGCCCGCTGTGCGGCGACGATTGCCATCCATCGTGCGGCCGTCTTG
GACGACGCCGGCGCACGGCTGTTTATGAGTTGCTTTGCGGTTCAGCGCTGGAGGACGTGATTCGTTCCCTCTCCAATGGG
AGAGGGAAGCCAAAGCGCTCTTATATGACGCTGGCGCGCTTGATCCGCAAGGGGATTGCGCTCGGCTACCTGCCCGTTCG
CATGCTTGAGCTCGTCGGAGGGGGAGAAAGATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
50.581 |
96.359 |
0.487 |