Detailed information NTG0170406

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: BKM67_RS01155
• Genome accession: NZ_CP017667
• Coordinates: 206659..209151 (-)
• Length: 830 a.a.
• NCBI ID: WP_105184019.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 1081
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 201659..214151

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BKM67_RS01130 (BKM67_01120)	dinB	202392..203459 (+)	1068	WP_105184024.1	DNA polymerase IV	-
BKM67_RS01135 (BKM67_01125)	-	203502..203921 (+)	420	WP_105184023.1	Rrf2 family transcriptional regulator	-
BKM67_RS01140 (BKM67_01130)	-	204056..204682 (+)	627	WP_105184022.1	NAD(P)-dependent oxidoreductase	-
BKM67_RS01145 (BKM67_01135)	-	204787..205707 (+)	921	WP_105184021.1	PfkB family carbohydrate kinase	-
BKM67_RS01150 (BKM67_01140)	-	205846..206541 (-)	696	WP_105184020.1	hypothetical protein	-
BKM67_RS01155 (BKM67_01145)	recD/recD2/recDB	206659..209151 (-)	2493	WP_105184019.1	ATP-dependent RecD-like DNA helicase	Machinery gene
BKM67_RS01165 (BKM67_01150)	lepB	209357..209986 (-)	630	WP_002935959.1	signal peptidase I	-
BKM67_RS01170 (BKM67_01155)	rnhC	209996..210886 (-)	891	WP_105184017.1	ribonuclease HIII	-
BKM67_RS01175 (BKM67_01160)	-	210971..211954 (+)	984	WP_105184016.1	Gfo/Idh/MocA family oxidoreductase	-
BKM67_RS01180 (BKM67_01165)	-	212303..213475 (+)	1173	WP_162636962.1	LysM domain-containing protein	-

Sequence

Protein

• Length: 830 a.a.
• Molecular weight: 93054.11 Da
• Isoelectric Point: 4.5191

>NTDB_id=170406 BKM67_RS01155 WP_105184019.1 206659..209151(-) (recD/recD2/recDB) [Streptococcus suis strain 1081]
MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVTGTIADVIEGEDYRFYGNLVTHPKYGQQLQISRYERS
KPTSAGLVKYFSSDHFKGIGRKTAEKIVELYGEDTIDKILAEPEKLTQITGLSSKNMQAFVEKLRLNYGTELILAKLAEY
GIPNKLAFQIQDQYKEKTLQIIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRFRAGMLFSLIHRSMETGDTYVEA
RDLLEATLELLEKSRHTELEPAAVAKELTGLIADDKVQQEGTKIFDNSLYFAEHGIHKNLTRLMGKNGFKPFPRADVEAA
IAELESMSSLTYDDIQKEAIVQAITNPLFILTGGPGTGKTTVINGIIAVYAILHNIDLTRNREECPVLLAAPTGRAARRM
NELTGLPSATIHRHLGLVEGQEESYRDDYLDADFIIVDEFSMVDTWLANQLFQNISSQTQVLIVGDAEQLPSVSPGQVLA
DLLKIDKLPSITLERIYRQSDDSTIVTLASQIHQGALPSDFREKKADRSYFEAQNEQIPALIERIVGAAIKSGIPATEVQ
ILAPMYRGAAGIDQLNTMTQALLNPLEDGELEFLHNEQAFRQGDRVIHLVNDAEANVFNGDLGYITDLLPAKYTDSKQDE
ITINFDGSEVTYPRNEWYKITLAYAMSIHKSQGSEFQVVILPITRTSHRMLQRNLVYTAITRSKSKLILLGEISAFDYAV
KNAGTVRKTYLVPRFQGEMAEQDSKESLTENKESKTATATQTQPPAQSDKPKQTEPVTENSQQLSLLDQDQPETTSGHPR
EYILTVDNLLTIDPMIGIDQSDIEEFFILK

Nucleotide

• Length: 2493 bp

>NTDB_id=170406 BKM67_RS01155 WP_105184019.1 206659..209151(-) (recD/recD2/recDB) [Streptococcus suis strain 1081]
ATGAACGAAGTGTATTTTACCGGTACTATTGACCGGATTATTTTTGAAAATCCTAGTAATTTTTATAAGATCCTTCTCCT
TGAAATCGAGGAGACAGACGCAGACTATGATGACTACGAAATTATTGTGACTGGAACGATTGCCGATGTCATTGAAGGAG
AAGACTATCGTTTCTATGGCAATCTGGTCACCCATCCCAAGTATGGTCAGCAGCTACAAATTTCTCGCTACGAACGTAGC
AAGCCTACCTCAGCTGGTCTGGTTAAGTATTTCTCTAGCGACCATTTCAAGGGAATTGGACGAAAAACAGCTGAAAAAAT
CGTTGAGCTCTATGGCGAGGATACCATTGATAAGATTTTAGCTGAACCTGAGAAACTGACCCAAATCACAGGCCTATCCA
GCAAGAACATGCAGGCATTTGTGGAGAAACTCCGCCTCAATTATGGAACCGAGCTGATCTTGGCAAAACTAGCCGAGTAT
GGCATTCCCAATAAATTGGCCTTTCAAATCCAAGACCAGTATAAGGAAAAAACACTTCAGATTATTGAAGAAAACCCCTA
TCAACTGGTCGAAGATGTCCAGGGGCTCGGCTTTACCATTGCCGATAGGATTGCGGAAAATCTAGGAATTGCCAGCGATT
CCCCCCAACGCTTTCGGGCAGGTATGCTCTTTAGCCTCATTCATCGCTCCATGGAAACAGGCGATACCTATGTGGAGGCC
AGAGACTTGCTGGAAGCAACCCTTGAACTGCTGGAAAAATCCCGCCATACAGAGCTGGAACCCGCTGCTGTTGCCAAAGA
ATTGACAGGACTGATTGCAGACGACAAGGTACAGCAAGAAGGCACAAAGATTTTTGACAACAGCCTCTACTTTGCCGAAC
ACGGTATCCATAAAAACTTGACCCGCCTGATGGGGAAAAATGGCTTCAAACCCTTCCCACGCGCAGACGTTGAGGCTGCC
ATAGCAGAGCTGGAAAGTATGTCTTCCCTGACCTACGATGACATTCAAAAAGAAGCCATTGTCCAAGCCATTACCAATCC
GCTATTCATTCTGACAGGCGGACCAGGGACTGGAAAGACAACGGTTATCAACGGTATTATCGCTGTCTATGCCATCTTGC
ATAATATTGACCTGACGCGCAACCGAGAAGAATGCCCTGTCCTCCTAGCCGCTCCAACTGGACGAGCAGCCAGACGGATG
AATGAATTGACAGGTCTGCCTTCCGCCACCATCCACCGCCATCTCGGTCTGGTAGAAGGACAGGAAGAATCCTACCGTGA
TGATTATTTGGATGCCGACTTTATCATCGTGGATGAGTTCTCTATGGTAGATACTTGGTTGGCAAACCAGCTCTTCCAGA
ACATCTCCTCCCAGACCCAAGTTCTGATTGTCGGCGATGCGGAGCAATTACCTTCTGTCAGTCCCGGTCAGGTCCTAGCT
GACCTCTTGAAAATTGACAAGCTGCCCAGCATCACTCTGGAACGCATCTACCGTCAATCCGATGATTCGACCATTGTTAC
CCTAGCCAGCCAGATTCACCAAGGTGCCCTGCCTAGCGATTTTCGTGAGAAAAAGGCTGACCGCTCCTATTTTGAAGCGC
AAAACGAACAAATTCCAGCCCTGATTGAACGCATTGTCGGCGCAGCTATCAAGTCCGGTATCCCTGCAACAGAGGTCCAA
ATCCTCGCTCCCATGTACCGTGGTGCCGCAGGTATTGACCAACTTAACACCATGACCCAGGCCCTGCTCAATCCCCTAGA
AGACGGAGAGCTGGAATTCCTCCACAACGAGCAGGCCTTTCGTCAAGGCGACCGAGTCATCCACCTAGTCAACGATGCTG
AGGCCAATGTCTTCAATGGCGACTTGGGCTACATCACCGACCTCCTGCCTGCCAAGTATACCGACTCCAAGCAGGACGAG
ATTACTATCAACTTCGACGGTAGCGAGGTCACCTATCCACGTAATGAATGGTACAAGATTACCCTGGCCTATGCCATGTC
CATCCACAAGTCCCAAGGTAGCGAGTTTCAGGTCGTCATCCTCCCCATCACCCGCACCAGCCACCGCATGCTCCAGCGCA
ACCTGGTCTACACCGCCATCACCCGCTCCAAGAGCAAGCTCATCCTCCTAGGCGAAATCTCCGCCTTCGACTACGCCGTC
AAAAACGCCGGAACCGTCCGAAAAACCTATCTGGTCCCACGTTTCCAAGGGGAAATGGCAGAGCAGGACAGTAAGGAAAG
CCTGACTGAAAACAAGGAAAGCAAAACAGCCACAGCCACACAAACCCAGCCCCCTGCCCAGTCAGATAAGCCAAAACAAA
CAGAGCCCGTAACAGAAAACAGCCAGCAACTATCCCTTCTTGACCAAGACCAGCCAGAAACAACAAGTGGACACCCCAGA
GAATATATTCTGACTGTGGACAACCTGCTAACCATCGACCCCATGATCGGCATAGATCAGTCAGATATTGAAGAGTTTTT
CATTCTTAAGTAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (663-710)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (575-645)

• AAA domain (AAA_30) (332-529)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	41.402	91.084	0.377