Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   FOL01_RS06780 Genome accession   NZ_CP014332
Coordinates   1380602..1382416 (-) Length   604 a.a.
NCBI ID   WP_075269923.1    Uniprot ID   A0A1L6RCD4
Organism   Weissella jogaejeotgali strain FOL01     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1375602..1387416
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOL01_RS06760 (FOL01_1295) ccpA 1376961..1377971 (-) 1011 WP_075269919.1 catabolite control protein A -
  FOL01_RS06765 (FOL01_1296) - 1378228..1379328 (+) 1101 WP_075269920.1 M24 family metallopeptidase -
  FOL01_RS06770 (FOL01_1297) - 1379429..1380019 (-) 591 WP_075269921.1 hypothetical protein -
  FOL01_RS06775 (FOL01_1298) - 1380057..1380455 (-) 399 WP_075269922.1 DUF948 domain-containing protein -
  FOL01_RS06780 (FOL01_1299) pepF 1380602..1382416 (-) 1815 WP_075269923.1 oligoendopeptidase F Regulator
  FOL01_RS06785 (FOL01_1300) - 1382519..1383538 (-) 1020 WP_075269924.1 competence protein CoiA -
  FOL01_RS06790 (FOL01_1301) - 1383627..1384397 (-) 771 WP_075269925.1 adaptor protein MecA -
  FOL01_RS06795 (FOL01_1302) spx 1384556..1384954 (-) 399 WP_075269926.1 transcriptional regulator Spx -
  FOL01_RS06800 (FOL01_1303) - 1385102..1386211 (-) 1110 WP_075269927.1 toxic anion resistance protein -
  FOL01_RS06805 (FOL01_1304) - 1386204..1386980 (-) 777 WP_083603455.1 5-bromo-4-chloroindolyl phosphate hydrolysis family protein -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 68280.14 Da        Isoelectric Point: 4.3720

>NTDB_id=170364 FOL01_RS06780 WP_075269923.1 1380602..1382416(-) (pepF) [Weissella jogaejeotgali strain FOL01]
MAKELPLREDLPESATWDLSTIFQSDEDWQDTYNEVAERLDTAEFFAANATQSGTALYNALQYGLGLMRDLEKLYVYASM
KSDQDTANGFYQGLSNKAESLAAKVSAAISFFDPAVLSLSSDQLAAYFAAEPRLNDYKHYFDDILTQKGHVLPENEEKLL
AAAGDVFGASERAFGMLDNADIQFDAVENDEGELETLSDGVYSRLLESVNPDVRRNAFKTFYASYMALDNTFASLIGSHV
KGHNYLASVHHYDSARQAALAADNVPETVYDTLVTEVNKALPLLHRYMKLRKRLLKLSELHSYDLYTPILGEPDYAIDYP
RAQAEALKALAPLGEDYLAIVQKAFDSRWIDVIENKGKRSGAYSGGSYDTNPFILLNWVDNLNNLSTLVHEMGHTVHSYL
TRTNQPYQYGDYPIFLAEIASTTNENLLTDYLLHTITDKKLKAYVLNQYLDGVKGTLFRQTQFAEFEQWMHETDVAGTPL
TAEVLNDAYAELNQRYYGPALTVDEEIAHEWERIPHFYYNYYVFQYSTGFAAATALADKILHEGQPAVDAYKEYLKAGAS
AFPIDVMKKAGVDMTKPDYLQETFKVFENRLNEFEQLVEELDFE

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=170364 FOL01_RS06780 WP_075269923.1 1380602..1382416(-) (pepF) [Weissella jogaejeotgali strain FOL01]
ATGGCTAAAGAATTACCTTTACGTGAAGATTTACCAGAGTCTGCGACATGGGATCTGAGTACGATTTTCCAAAGCGATGA
AGACTGGCAAGATACTTATAATGAAGTAGCGGAGCGTCTTGATACGGCAGAATTTTTTGCCGCTAATGCAACGCAATCGG
GAACTGCATTATATAATGCGTTACAGTATGGATTAGGCTTGATGCGTGATTTAGAAAAGTTATATGTGTACGCTTCAATG
AAATCTGACCAGGATACAGCTAATGGATTCTACCAAGGCCTAAGTAACAAAGCTGAAAGCTTAGCAGCCAAAGTTTCTGC
AGCCATTTCATTCTTTGATCCAGCAGTGTTGTCACTATCGTCAGACCAATTAGCTGCGTATTTTGCAGCTGAGCCGCGTT
TGAATGACTACAAACACTATTTTGACGATATTTTGACGCAAAAAGGACATGTTCTGCCTGAAAATGAAGAGAAATTATTG
GCCGCTGCTGGGGATGTGTTTGGTGCTTCAGAACGTGCGTTTGGTATGTTAGATAACGCTGATATCCAATTTGACGCTGT
GGAGAATGATGAAGGTGAATTAGAAACACTATCAGATGGTGTGTATTCACGACTTCTAGAATCTGTTAATCCCGATGTAC
GTAGAAATGCCTTTAAAACGTTCTACGCATCTTATATGGCACTAGATAATACGTTTGCCTCATTAATTGGTAGCCATGTT
AAGGGACACAACTACCTAGCAAGTGTTCATCATTATGATTCAGCTCGTCAAGCTGCCTTAGCTGCTGATAATGTTCCCGA
AACAGTTTATGATACGTTAGTTACTGAAGTAAATAAGGCGTTGCCATTATTGCATCGCTACATGAAGTTACGTAAACGTT
TGTTAAAGCTATCAGAATTACACTCTTATGACCTTTATACACCTATTCTTGGTGAACCGGATTATGCGATTGACTATCCT
CGTGCACAAGCTGAAGCATTAAAGGCATTAGCACCTTTGGGTGAGGATTATCTGGCTATTGTACAAAAGGCCTTTGATAG
TCGTTGGATTGATGTTATTGAAAACAAAGGTAAACGATCAGGTGCCTACTCAGGTGGTTCTTACGATACAAATCCATTTA
TCTTACTAAATTGGGTAGATAATTTGAATAATTTGAGTACATTGGTACACGAAATGGGACACACCGTTCATTCATATTTG
ACGAGGACAAATCAACCATATCAATATGGTGATTACCCAATCTTTCTTGCTGAGATTGCCTCAACAACCAATGAAAATTT
GTTGACCGATTACCTGTTACATACGATCACTGATAAGAAATTAAAAGCATACGTATTAAATCAATACTTGGATGGTGTCA
AAGGTACCCTGTTCCGACAAACACAATTTGCTGAATTTGAACAATGGATGCATGAGACTGACGTTGCAGGGACACCGTTA
ACGGCTGAAGTACTTAATGATGCTTATGCCGAATTGAACCAACGCTACTATGGACCAGCTTTGACTGTAGATGAAGAAAT
TGCGCATGAGTGGGAACGTATTCCGCACTTTTACTATAATTATTATGTCTTCCAGTACAGTACTGGTTTTGCGGCAGCAA
CTGCTTTGGCAGATAAAATCTTACATGAAGGTCAGCCGGCAGTTGATGCATATAAAGAATATTTGAAGGCAGGTGCGTCA
GCCTTCCCAATCGATGTCATGAAAAAAGCAGGTGTCGATATGACGAAACCAGATTATCTACAAGAAACTTTCAAAGTATT
TGAAAATCGCTTGAATGAATTTGAGCAGTTGGTAGAGGAGTTAGACTTCGAATAG

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(117-184)

Peptidase family M3 (Peptidase_M3)

(205-585)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1L6RCD4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

52.782

98.179

0.518

Multiple sequence alignment