Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | AXF35_RS06185 | Genome accession | NZ_CP014255 |
| Coordinates | 1332938..1334266 (+) | Length | 442 a.a. |
| NCBI ID | WP_027221416.1 | Uniprot ID | A0AAX2IUW0 |
| Organism | Legionella pneumophila subsp. pascullei strain F-4185 | ||
| Function | regulate pilin expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1327938..1339266
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AXF35_RS06165 (AXF35_10655) | amrS | 1328067..1329143 (+) | 1077 | WP_027221412.1 | AmmeMemoRadiSam system radical SAM enzyme | - |
| AXF35_RS06170 (AXF35_10650) | - | 1329202..1329621 (+) | 420 | WP_027221413.1 | lpg1171 family Dot/Icm T4SS effector | - |
| AXF35_RS06175 (AXF35_10645) | lidL | 1329771..1331255 (+) | 1485 | WP_080273046.1 | Dot/Icm type IV secretion system effector LidL | - |
| AXF35_RS06180 (AXF35_10640) | - | 1331355..1332941 (+) | 1587 | WP_027221415.1 | sensor histidine kinase | - |
| AXF35_RS06185 (AXF35_10635) | pilR | 1332938..1334266 (+) | 1329 | WP_027221416.1 | sigma-54-dependent transcriptional regulator | Regulator |
| AXF35_RS06190 (AXF35_10630) | - | 1334530..1334775 (+) | 246 | WP_011213531.1 | hypothetical protein | - |
| AXF35_RS06195 (AXF35_10625) | - | 1334907..1336343 (-) | 1437 | WP_027221417.1 | M48 family metalloprotease | - |
| AXF35_RS06200 (AXF35_10620) | ribD | 1336406..1337479 (+) | 1074 | WP_027221418.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| AXF35_RS06205 (AXF35_10615) | - | 1337464..1338078 (+) | 615 | WP_027221419.1 | riboflavin synthase | - |
Sequence
Protein
Download Length: 442 a.a. Molecular weight: 49165.14 Da Isoelectric Point: 6.5929
>NTDB_id=169817 AXF35_RS06185 WP_027221416.1 1332938..1334266(+) (pilR) [Legionella pneumophila subsp. pascullei strain F-4185]
MTKSKVLVIDDEPDIRELLTLTLSRMGLACDAVSDFKQGLEHIKQNYYSLVLTDMRLPDGDGIEIVKFIQKYKPQLPVAV
ITAYGNVEGAVNTLKAGAFDYVSKPVDLKMLRDLVKTALSMQNPSTENPDEGLLVGESLVMQQLRESIHKLARSQAPVFI
QGDSGVGKELVAQLIHANGPRKDKPFIPVNCGAIPGELMESEFFGHKKGSFTGAISDKTGLFVAAHGGTLFLDEIAELPL
AMQVKLLRAIQEKAIKPIGELYEIPVDVRILSASHKSLIEEINAGKFRQDLYYRINVIELRVPTLMERLSDIPCLTEAIL
KKLSKNQNRSLVKINPACFEILSHYHFPGNVRELENILERAMAMCEEEIIEPGDLHLPRTTITPVVAASPVSTNLNGYLQ
DQEKELILDALEKTKWNRTAAAQLLGVSFRTLRYRLKKLGLD
MTKSKVLVIDDEPDIRELLTLTLSRMGLACDAVSDFKQGLEHIKQNYYSLVLTDMRLPDGDGIEIVKFIQKYKPQLPVAV
ITAYGNVEGAVNTLKAGAFDYVSKPVDLKMLRDLVKTALSMQNPSTENPDEGLLVGESLVMQQLRESIHKLARSQAPVFI
QGDSGVGKELVAQLIHANGPRKDKPFIPVNCGAIPGELMESEFFGHKKGSFTGAISDKTGLFVAAHGGTLFLDEIAELPL
AMQVKLLRAIQEKAIKPIGELYEIPVDVRILSASHKSLIEEINAGKFRQDLYYRINVIELRVPTLMERLSDIPCLTEAIL
KKLSKNQNRSLVKINPACFEILSHYHFPGNVRELENILERAMAMCEEEIIEPGDLHLPRTTITPVVAASPVSTNLNGYLQ
DQEKELILDALEKTKWNRTAAAQLLGVSFRTLRYRLKKLGLD
Nucleotide
Download Length: 1329 bp
>NTDB_id=169817 AXF35_RS06185 WP_027221416.1 1332938..1334266(+) (pilR) [Legionella pneumophila subsp. pascullei strain F-4185]
ATGACTAAAAGCAAAGTGCTCGTTATAGATGACGAACCAGACATAAGAGAGTTATTAACTCTTACTTTATCGCGCATGGG
CTTAGCTTGCGATGCGGTGTCTGATTTTAAGCAGGGCTTAGAACATATAAAACAAAATTATTATTCTTTGGTTTTAACCG
ACATGCGTTTGCCTGATGGAGATGGTATAGAAATTGTTAAATTCATTCAGAAATACAAACCACAGTTGCCAGTTGCTGTC
ATTACCGCTTATGGAAATGTCGAGGGTGCGGTCAATACTTTAAAGGCTGGGGCATTTGATTATGTATCCAAACCCGTAGA
CTTAAAGATGCTTAGAGATCTAGTCAAGACCGCATTATCCATGCAAAATCCGTCTACCGAAAATCCTGATGAAGGTTTAT
TGGTTGGTGAGAGTTTGGTAATGCAACAACTTCGTGAAAGCATCCATAAATTAGCTCGCAGTCAGGCACCGGTTTTTATT
CAAGGTGATTCAGGTGTTGGGAAAGAACTTGTTGCTCAGCTGATTCATGCTAATGGTCCCAGAAAAGATAAGCCATTTAT
TCCTGTAAATTGTGGTGCTATACCTGGTGAGTTGATGGAATCAGAGTTTTTTGGCCATAAAAAAGGGAGCTTTACAGGAG
CGATTTCTGATAAAACAGGGTTATTTGTTGCGGCTCATGGTGGCACTTTGTTTCTTGATGAAATCGCCGAGCTTCCTCTC
GCCATGCAGGTTAAATTACTACGTGCAATTCAAGAGAAGGCAATTAAACCAATAGGTGAGTTATATGAAATTCCGGTGGA
TGTACGCATTCTAAGTGCGAGCCATAAAAGTTTGATTGAGGAAATCAATGCAGGGAAGTTTCGTCAAGATTTGTATTATC
GAATTAATGTGATTGAATTGCGTGTCCCAACTTTAATGGAAAGACTTTCTGATATTCCTTGCCTGACGGAGGCGATATTA
AAAAAATTATCTAAAAATCAAAATAGAAGCCTGGTCAAAATCAATCCAGCCTGTTTTGAAATATTGAGTCATTATCATTT
TCCAGGGAATGTCAGAGAATTGGAGAATATCCTCGAGCGTGCCATGGCTATGTGTGAGGAAGAGATCATAGAACCAGGCG
ATTTACATTTGCCTAGAACGACAATAACCCCAGTTGTTGCTGCATCCCCAGTGTCAACTAACTTAAATGGTTATCTTCAG
GATCAGGAAAAGGAATTAATTCTAGATGCTCTTGAGAAAACAAAATGGAACAGGACAGCCGCTGCACAACTATTAGGTGT
CAGCTTCCGCACTCTCCGTTATCGATTAAAAAAACTGGGCCTTGATTAG
ATGACTAAAAGCAAAGTGCTCGTTATAGATGACGAACCAGACATAAGAGAGTTATTAACTCTTACTTTATCGCGCATGGG
CTTAGCTTGCGATGCGGTGTCTGATTTTAAGCAGGGCTTAGAACATATAAAACAAAATTATTATTCTTTGGTTTTAACCG
ACATGCGTTTGCCTGATGGAGATGGTATAGAAATTGTTAAATTCATTCAGAAATACAAACCACAGTTGCCAGTTGCTGTC
ATTACCGCTTATGGAAATGTCGAGGGTGCGGTCAATACTTTAAAGGCTGGGGCATTTGATTATGTATCCAAACCCGTAGA
CTTAAAGATGCTTAGAGATCTAGTCAAGACCGCATTATCCATGCAAAATCCGTCTACCGAAAATCCTGATGAAGGTTTAT
TGGTTGGTGAGAGTTTGGTAATGCAACAACTTCGTGAAAGCATCCATAAATTAGCTCGCAGTCAGGCACCGGTTTTTATT
CAAGGTGATTCAGGTGTTGGGAAAGAACTTGTTGCTCAGCTGATTCATGCTAATGGTCCCAGAAAAGATAAGCCATTTAT
TCCTGTAAATTGTGGTGCTATACCTGGTGAGTTGATGGAATCAGAGTTTTTTGGCCATAAAAAAGGGAGCTTTACAGGAG
CGATTTCTGATAAAACAGGGTTATTTGTTGCGGCTCATGGTGGCACTTTGTTTCTTGATGAAATCGCCGAGCTTCCTCTC
GCCATGCAGGTTAAATTACTACGTGCAATTCAAGAGAAGGCAATTAAACCAATAGGTGAGTTATATGAAATTCCGGTGGA
TGTACGCATTCTAAGTGCGAGCCATAAAAGTTTGATTGAGGAAATCAATGCAGGGAAGTTTCGTCAAGATTTGTATTATC
GAATTAATGTGATTGAATTGCGTGTCCCAACTTTAATGGAAAGACTTTCTGATATTCCTTGCCTGACGGAGGCGATATTA
AAAAAATTATCTAAAAATCAAAATAGAAGCCTGGTCAAAATCAATCCAGCCTGTTTTGAAATATTGAGTCATTATCATTT
TCCAGGGAATGTCAGAGAATTGGAGAATATCCTCGAGCGTGCCATGGCTATGTGTGAGGAAGAGATCATAGAACCAGGCG
ATTTACATTTGCCTAGAACGACAATAACCCCAGTTGTTGCTGCATCCCCAGTGTCAACTAACTTAAATGGTTATCTTCAG
GATCAGGAAAAGGAATTAATTCTAGATGCTCTTGAGAAAACAAAATGGAACAGGACAGCCGCTGCACAACTATTAGGTGT
CAGCTTCCGCACTCTCCGTTATCGATTAAAAAAACTGGGCCTTGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Pseudomonas aeruginosa PAK |
59.326 |
100 |
0.597 |
| pilR | Acinetobacter baumannii strain A118 |
48.802 |
100 |
0.507 |