Detailed information NTG0169294

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: A4W84_RS06480
• Genome accession: NZ_CP017568
• Coordinates: 1280895..1283207 (-)
• Length: 770 a.a.
• NCBI ID: WP_251908046.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain TMW 1.417
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1275895..1288207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W84_RS06455 (A4W84_06355)	-	1277030..1278775 (-)	1746	WP_251908044.1	ABC transporter ATP-binding protein	-
A4W84_RS06460 (A4W84_06360)	-	1278917..1279147 (-)	231	WP_011374970.1	YneF family protein	-
A4W84_RS06465 (A4W84_06365)	-	1279228..1279470 (-)	243	WP_011374971.1	DUF896 domain-containing protein	-
A4W84_RS06470 (A4W84_06370)	dinR/lexA	1279605..1280219 (+)	615	WP_251908045.1	transcriptional repressor LexA	Regulator
A4W84_RS06475 (A4W84_06375)	-	1280353..1280871 (-)	519	WP_011374973.1	adenine phosphoribosyltransferase	-
A4W84_RS06480 (A4W84_06380)	recJ	1280895..1283207 (-)	2313	WP_251908046.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
A4W84_RS06485 (A4W84_06385)	galE	1283352..1284344 (+)	993	WP_011374975.1	UDP-glucose 4-epimerase GalE	-
A4W84_RS06490 (A4W84_06390)	-	1284430..1284795 (+)	366	WP_011374976.1	DUF1304 domain-containing protein	-
A4W84_RS06495 (A4W84_06395)	-	1284812..1285138 (+)	327	WP_011374977.1	heavy metal-binding domain-containing protein	-
A4W84_RS06500 (A4W84_06400)	-	1285189..1287024 (-)	1836	WP_251908047.1	WxL domain-containing protein	-
A4W84_RS06505 (A4W84_06405)	-	1287014..1287409 (-)	396	WP_016265361.1	LPXTG cell wall anchor domain-containing protein	-

Sequence

Protein

• Length: 770 a.a.
• Molecular weight: 84840.61 Da
• Isoelectric Point: 4.5197

>NTDB_id=169294 A4W84_RS06480 WP_251908046.1 1280895..1283207(-) (recJ) [Latilactobacillus sakei strain TMW 1.417]
MEAQYEWQLKPVPTEDELQTITKDNPLPKAAAQLLWQRGLRDAEQINDFMNPDVGQLHDPYALHDMQKAIDRIQEAIVNG
EKITIYGDYDADGITSTTLMKETLDDLGADVEVYVPNRFKDGYGPNLEAYKRLIENGTQLIVTVDNGVSGLEPIAYAQEH
GVDVVVTDHHELPSELPNAVAIVHPRHPEGQYPFGELCGVGVAFKVATALLEEIPYDKLDLAAIGTVCDIVPLVDENRTL
VSLGLQQLQNTDRPGLVALCQSAGLEQATLDATNIGFGIGPRLNAIGRLGDATLGVQLLTTLDDEEAVEQAQFIEQQNKK
RQGLVQEITATAMTIAETPENQASATLVIAHEGWHEGVLGIVASHVVEQTGKPTLVLTIDPETGLAKGSGRSVTAFHLFK
ALDAHRELLVHFGGHHMAVGLTAKVDQLALIQTAMNEYAQVNQLDLTGRQPLPVDLALTLADITPDLYQALQQLAPFGSD
NPEPLIELSAPQLADVKQIGADQKHLKMMAVDQQQQLAVLAFNKGALMPDLTAAEDVKLVGSLSENTWRGQTTLQLMVKD
LATSGQVVLDQRSNRLTKQLFQSTGDYVFFNDKMREQLQSYLPAGSQALLATDEQVATSQELIVVDEPADLTAFEQFYQQ
QQAAKLSLIFYAKHSAYLEGMPTKQQFATFLVYLRKHPNIEKARLAELAAYLKLQLPLMIFMLQVFFDLGFVRIERGLIT
AELQPEKHALESAPSYQKRLAKIEMEKQLVYSTFTEVKDWLATLPAVANR

Nucleotide

• Length: 2313 bp

>NTDB_id=169294 A4W84_RS06480 WP_251908046.1 1280895..1283207(-) (recJ) [Latilactobacillus sakei strain TMW 1.417]
TTGGAAGCACAATATGAATGGCAATTAAAACCAGTACCAACTGAAGATGAATTACAAACAATTACAAAAGACAATCCGCT
ACCCAAGGCTGCGGCCCAACTTTTGTGGCAACGTGGCTTGCGGGATGCAGAGCAGATCAATGATTTTATGAATCCCGATG
TCGGTCAACTTCACGATCCATACGCTTTGCATGATATGCAAAAGGCGATTGATCGAATTCAAGAAGCGATTGTGAACGGC
GAAAAAATTACGATTTATGGCGATTATGACGCGGACGGGATCACAAGTACCACTTTGATGAAGGAAACTTTAGACGACTT
AGGTGCCGATGTTGAAGTCTATGTGCCTAATCGTTTTAAGGATGGCTACGGGCCTAATTTAGAAGCTTATAAACGCTTGA
TTGAAAATGGCACCCAATTAATTGTGACCGTCGATAACGGGGTGAGTGGCTTAGAACCAATCGCTTATGCGCAAGAACAC
GGTGTTGACGTGGTCGTGACCGATCACCATGAATTACCATCAGAATTACCCAACGCAGTGGCGATTGTGCATCCCAGACA
TCCAGAAGGGCAATATCCTTTTGGCGAACTCTGTGGGGTCGGTGTGGCGTTTAAAGTGGCGACTGCTTTATTAGAAGAGA
TTCCTTACGATAAATTAGATTTAGCCGCAATCGGGACGGTTTGTGATATCGTCCCCCTAGTTGATGAAAACCGGACATTG
GTTAGTTTAGGCTTACAACAATTACAAAATACCGATCGACCAGGTTTGGTCGCATTGTGTCAATCAGCTGGCTTAGAACA
AGCGACACTAGATGCCACTAACATTGGCTTTGGGATTGGTCCCCGGTTAAACGCAATTGGTCGTTTAGGTGATGCAACTC
TTGGTGTGCAACTATTGACGACGCTTGATGACGAAGAAGCAGTCGAGCAGGCCCAATTTATTGAACAACAAAATAAAAAA
CGCCAAGGTCTAGTGCAAGAAATTACGGCAACGGCAATGACAATTGCTGAAACACCGGAAAACCAAGCGAGTGCCACCTT
AGTTATTGCCCACGAAGGTTGGCATGAAGGGGTTCTAGGGATTGTGGCTAGTCATGTTGTTGAACAGACCGGTAAACCAA
CCTTAGTCTTGACGATTGACCCGGAAACTGGTTTAGCTAAAGGCTCTGGCCGTAGTGTGACAGCTTTCCATTTATTTAAA
GCGTTAGATGCCCACCGTGAATTATTGGTTCATTTTGGTGGCCATCACATGGCAGTTGGCTTGACTGCTAAGGTTGATCA
ATTAGCGCTGATTCAAACTGCAATGAACGAGTATGCGCAAGTTAATCAGTTAGATTTAACGGGACGCCAACCATTACCAG
TTGATTTGGCGCTGACGTTGGCTGATATTACACCTGATTTATATCAAGCATTGCAACAACTGGCACCGTTTGGCAGTGAT
AATCCAGAACCGTTAATCGAACTTAGCGCGCCCCAGTTGGCCGATGTCAAACAAATCGGTGCTGATCAGAAACATTTGAA
GATGATGGCGGTCGATCAACAACAACAATTAGCGGTTTTAGCTTTCAATAAAGGGGCTTTGATGCCCGATTTAACTGCCG
CTGAAGATGTGAAATTAGTCGGGAGTTTGAGTGAGAATACTTGGCGTGGCCAGACGACGTTGCAATTAATGGTAAAAGAC
CTTGCTACAAGTGGGCAAGTCGTACTTGATCAACGCAGCAATCGCCTGACAAAACAATTATTCCAATCAACAGGCGACTA
CGTCTTTTTTAATGATAAAATGCGCGAGCAACTGCAGTCTTATTTACCGGCAGGGAGTCAGGCGCTGTTAGCGACCGATG
AACAAGTTGCCACAAGCCAAGAGTTGATTGTGGTCGATGAACCAGCTGATTTAACTGCTTTTGAACAATTTTATCAACAA
CAACAGGCTGCTAAATTAAGCTTAATTTTTTATGCCAAACACTCTGCTTACTTAGAAGGAATGCCGACAAAACAACAGTT
TGCGACCTTCTTAGTTTACTTACGGAAGCATCCGAACATTGAAAAAGCGCGGTTAGCTGAATTAGCAGCGTATTTAAAAT
TACAATTACCGTTAATGATTTTCATGTTGCAGGTGTTTTTTGACCTCGGATTTGTTAGAATAGAACGTGGTCTGATTACG
GCCGAGTTACAACCTGAAAAGCATGCACTGGAAAGTGCACCAAGTTATCAAAAACGATTAGCTAAAATTGAAATGGAAAA
ACAGCTTGTTTATTCAACCTTTACCGAGGTGAAAGACTGGCTAGCAACTCTCCCAGCAGTAGCAAATCGCTAA

Domains

Predicted by InterProScan.

• DHHA1 domain (DHHA1) (318-437)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (568-761)

• DHH family (DHH) (82-226)

• RecJ OB domain (RecJ_OB) (454-560)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	40.604	98.831	0.401
recJ	Bacillus subtilis subsp. subtilis str. 168	37.371	100	0.377