Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AWM73_RS08895 | Genome accession | NZ_CP014161 |
| Coordinates | 1951273..1951845 (+) | Length | 190 a.a. |
| NCBI ID | WP_060779015.1 | Uniprot ID | A0A0X8FFW9 |
| Organism | Aerococcus urinae strain CCUG 36881 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1946273..1956845
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWM73_RS08875 (AWM73_08875) | - | 1946878..1947867 (-) | 990 | WP_060779012.1 | asparaginase | - |
| AWM73_RS08880 (AWM73_08880) | - | 1947899..1949317 (-) | 1419 | WP_060779013.1 | YfcC family protein | - |
| AWM73_RS08885 (AWM73_08885) | - | 1949310..1950611 (-) | 1302 | WP_060779014.1 | amidohydrolase | - |
| AWM73_RS08890 (AWM73_08890) | rpsF | 1950935..1951237 (+) | 303 | WP_013669618.1 | 30S ribosomal protein S6 | - |
| AWM73_RS08895 (AWM73_08895) | ssb | 1951273..1951845 (+) | 573 | WP_060779015.1 | single-stranded DNA-binding protein | Machinery gene |
| AWM73_RS08900 (AWM73_08900) | rpsR | 1951873..1952112 (+) | 240 | WP_013669454.1 | 30S ribosomal protein S18 | - |
| AWM73_RS08905 (AWM73_08905) | - | 1952358..1952567 (+) | 210 | WP_060779016.1 | helix-turn-helix transcriptional regulator | - |
| AWM73_RS08910 (AWM73_08910) | - | 1952548..1953069 (+) | 522 | WP_158083606.1 | DUF3278 domain-containing protein | - |
Sequence
Protein
Download Length: 190 a.a. Molecular weight: 20886.50 Da Isoelectric Point: 4.2964
>NTDB_id=169010 AWM73_RS08895 WP_060779015.1 1951273..1951845(+) (ssb) [Aerococcus urinae strain CCUG 36881]
MINNVVLVGRLTREVDLRYTQSGTAVANFTVACDRNYRNAQGETQTDFINCVMWRKAAENFAKFTRKGSLVGIEGNIQTR
NYENQQGQRVYVTEVLANNFSLLEPKSVTEQRPQASDNGNNFANPGNNFANDSFGSNQSFGGYNNQQDSPSMNDNSFGGS
NDPFAGGNNNPFPSNDNDGSINIADDDLPF
MINNVVLVGRLTREVDLRYTQSGTAVANFTVACDRNYRNAQGETQTDFINCVMWRKAAENFAKFTRKGSLVGIEGNIQTR
NYENQQGQRVYVTEVLANNFSLLEPKSVTEQRPQASDNGNNFANPGNNFANDSFGSNQSFGGYNNQQDSPSMNDNSFGGS
NDPFAGGNNNPFPSNDNDGSINIADDDLPF
Nucleotide
Download Length: 573 bp
>NTDB_id=169010 AWM73_RS08895 WP_060779015.1 1951273..1951845(+) (ssb) [Aerococcus urinae strain CCUG 36881]
ATGATTAATAATGTCGTCTTAGTCGGCCGATTAACTCGGGAAGTTGATCTACGTTATACCCAAAGTGGAACTGCAGTAGC
CAACTTTACTGTAGCTTGTGACCGTAACTACCGCAATGCCCAAGGTGAAACCCAAACCGATTTCATCAATTGTGTGATGT
GGCGTAAGGCTGCTGAAAACTTTGCTAAATTCACACGGAAAGGTTCTTTGGTAGGGATTGAAGGGAATATTCAAACCCGT
AATTACGAAAACCAACAAGGCCAACGTGTCTATGTGACTGAAGTTTTAGCCAATAACTTTAGCCTACTGGAACCTAAGAG
TGTCACTGAACAACGCCCACAAGCCAGTGACAATGGCAATAACTTTGCCAACCCAGGCAATAATTTTGCTAATGACTCTT
TTGGCTCCAATCAAAGCTTTGGCGGCTATAATAATCAACAAGATTCCCCTTCAATGAATGATAACAGCTTTGGTGGATCC
AACGACCCATTTGCTGGTGGAAATAATAATCCTTTCCCATCAAATGATAATGACGGATCGATCAATATCGCTGATGATGA
TCTTCCATTCTAG
ATGATTAATAATGTCGTCTTAGTCGGCCGATTAACTCGGGAAGTTGATCTACGTTATACCCAAAGTGGAACTGCAGTAGC
CAACTTTACTGTAGCTTGTGACCGTAACTACCGCAATGCCCAAGGTGAAACCCAAACCGATTTCATCAATTGTGTGATGT
GGCGTAAGGCTGCTGAAAACTTTGCTAAATTCACACGGAAAGGTTCTTTGGTAGGGATTGAAGGGAATATTCAAACCCGT
AATTACGAAAACCAACAAGGCCAACGTGTCTATGTGACTGAAGTTTTAGCCAATAACTTTAGCCTACTGGAACCTAAGAG
TGTCACTGAACAACGCCCACAAGCCAGTGACAATGGCAATAACTTTGCCAACCCAGGCAATAATTTTGCTAATGACTCTT
TTGGCTCCAATCAAAGCTTTGGCGGCTATAATAATCAACAAGATTCCCCTTCAATGAATGATAACAGCTTTGGTGGATCC
AACGACCCATTTGCTGGTGGAAATAATAATCCTTTCCCATCAAATGATAATGACGGATCGATCAATATCGCTGATGATGA
TCTTCCATTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
53.368 |
100 |
0.542 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
48.187 |
100 |
0.489 |