Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   PcP3B5_RS02710 Genome accession   NZ_CP014158
Coordinates   597077..597484 (+) Length   135 a.a.
NCBI ID   WP_009615249.1    Uniprot ID   A0A024H9X0
Organism   Pseudomonas citronellolis strain P3B5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 592077..602484
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PcP3B5_RS02680 (PcP3B5_05430) - 592163..593167 (-) 1005 WP_061560518.1 aspartate carbamoyltransferase catalytic subunit -
  PcP3B5_RS02685 (PcP3B5_05440) pyrR 593206..593715 (-) 510 WP_009615244.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PcP3B5_RS02690 (PcP3B5_05450) ruvX 593836..594264 (-) 429 WP_009615245.1 Holliday junction resolvase RuvX -
  PcP3B5_RS02695 (PcP3B5_05460) - 594264..594830 (-) 567 WP_009615246.1 YqgE/AlgH family protein -
  PcP3B5_RS02700 (PcP3B5_05470) - 594881..595774 (-) 894 WP_009615247.1 energy transducer TonB -
  PcP3B5_RS02705 (PcP3B5_05480) gshB 595859..596830 (-) 972 WP_043317848.1 glutathione synthase -
  PcP3B5_RS02710 (PcP3B5_05490) pilG 597077..597484 (+) 408 WP_009615249.1 twitching motility response regulator PilG Regulator
  PcP3B5_RS02715 (PcP3B5_05500) pilH 597529..597894 (+) 366 WP_009615257.1 twitching motility response regulator PilH -
  PcP3B5_RS02720 (PcP3B5_05510) - 597940..598476 (+) 537 WP_009615258.1 chemotaxis protein CheW -
  PcP3B5_RS02725 (PcP3B5_05520) - 598560..600608 (+) 2049 WP_043269485.1 methyl-accepting chemotaxis protein -
  PcP3B5_RS02730 (PcP3B5_05530) - 600668..601525 (+) 858 WP_061560519.1 protein-glutamate O-methyltransferase -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14828.19 Da        Isoelectric Point: 6.7119

>NTDB_id=168916 PcP3B5_RS02710 WP_009615249.1 597077..597484(+) (pilG) [Pseudomonas citronellolis strain P3B5]
MEQHSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPDFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=168916 PcP3B5_RS02710 WP_009615249.1 597077..597484(+) (pilG) [Pseudomonas citronellolis strain P3B5]
ATGGAACAGCATTCCGATGGTTTGAAGGTGATGGTCATCGACGATTCCAAGACGATCCGTCGTACCGCCGAAACCCTGCT
CAAGAAAGTCGGCTGCGATGTCATCACGGCCATCGATGGCTTCGACGCGCTGGCGAAGATCGCCGACACCCATCCGAACA
TCATCTTCGTCGACATCATGATGCCTCGGCTCGACGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCCTTCAAA
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGTCGTATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCCTTCAGCAAGGAAGAGCTGCTCGGCGCCATCAAGACCCACGTGCCCGACTTCACCCCGGTGGAGCAAG
CTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A024H9X0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

92.593

0.696

  vicR Streptococcus mutans UA159

42.063

93.333

0.393


Multiple sequence alignment