Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | AL468_RS21540 | Genome accession | NZ_CP014134 |
| Coordinates | 2552600..2553214 (-) | Length | 204 a.a. |
| NCBI ID | WP_031780576.1 | Uniprot ID | A0A0T7EDM0 |
| Organism | Vibrio diabolicus strain FDAARGOS_99 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2547600..2558214
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL468_RS21530 (AL468_12945) | aceF | 2548860..2550758 (+) | 1899 | WP_104974822.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| AL468_RS21535 (AL468_12950) | lpdA | 2551026..2552453 (+) | 1428 | WP_005379993.1 | dihydrolipoyl dehydrogenase | - |
| AL468_RS21540 (AL468_12955) | opaR | 2552600..2553214 (-) | 615 | WP_031780576.1 | transcriptional regulator OpaR | Regulator |
| AL468_RS21545 (AL468_12960) | hpt | 2553533..2554063 (+) | 531 | WP_005379995.1 | hypoxanthine phosphoribosyltransferase | - |
| AL468_RS21550 (AL468_12965) | can | 2554144..2554812 (-) | 669 | WP_005379996.1 | carbonate dehydratase | - |
| AL468_RS21555 (AL468_12970) | - | 2555090..2556760 (+) | 1671 | WP_046875129.1 | SulP family inorganic anion transporter | - |
| AL468_RS21560 (AL468_12975) | - | 2557013..2557930 (+) | 918 | WP_005396713.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23612.89 Da Isoelectric Point: 6.4042
>NTDB_id=168592 AL468_RS21540 WP_031780576.1 2552600..2553214(-) (opaR) [Vibrio diabolicus strain FDAARGOS_99]
MDSIAKRPRTRLSPIKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSE
HLANLFHGICYSLFVQANRAKSEAELKHLVSSYLDMLCIYNREH
MDSIAKRPRTRLSPIKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSE
HLANLFHGICYSLFVQANRAKSEAELKHLVSSYLDMLCIYNREH
Nucleotide
Download Length: 615 bp
>NTDB_id=168592 AL468_RS21540 WP_031780576.1 2552600..2553214(-) (opaR) [Vibrio diabolicus strain FDAARGOS_99]
ATGGACTCAATTGCAAAGAGACCTAGAACTAGGCTTTCCCCGATTAAGCGTAAGCAACAGTTAATGGAAATCGCATTGGA
AGTGTTTGCGCGCCGCGGCATCGGTCGTGGTGGTCACGCTGATATCGCAGAAATTGCTCAAGTTTCTGTGGCGACCGTTT
TTAACTACTTCCCGACTCGTGAAGACTTAGTGGATGAAGTACTCAACCACGTCGTACGTCAGTTCTCGAACTTCCTATCG
GATAACATTGACTTAGACTTACACGCGCGTGAAAACATCGCCAATATTACTAATGCGATGATAGAGCTTGTCAGCCAAGA
TTGTCACTGGCTAAAAGTTTGGTTCGAGTGGAGTGCTTCAACACGTGATGAAGTATGGCCATTGTTTGTTTCAACTAACC
GTACTAACCAGTTGCTGGTACAAAACATGTTCATTAAAGCGATTGAACGTGGCGAAGTGTGTGACCAGCACGATTCAGAA
CACTTGGCAAACTTGTTCCATGGTATTTGTTACTCACTGTTTGTCCAAGCGAACCGTGCAAAAAGTGAAGCGGAACTTAA
GCACCTTGTTAGTTCATACTTAGACATGCTTTGCATTTACAACCGTGAACACTAA
ATGGACTCAATTGCAAAGAGACCTAGAACTAGGCTTTCCCCGATTAAGCGTAAGCAACAGTTAATGGAAATCGCATTGGA
AGTGTTTGCGCGCCGCGGCATCGGTCGTGGTGGTCACGCTGATATCGCAGAAATTGCTCAAGTTTCTGTGGCGACCGTTT
TTAACTACTTCCCGACTCGTGAAGACTTAGTGGATGAAGTACTCAACCACGTCGTACGTCAGTTCTCGAACTTCCTATCG
GATAACATTGACTTAGACTTACACGCGCGTGAAAACATCGCCAATATTACTAATGCGATGATAGAGCTTGTCAGCCAAGA
TTGTCACTGGCTAAAAGTTTGGTTCGAGTGGAGTGCTTCAACACGTGATGAAGTATGGCCATTGTTTGTTTCAACTAACC
GTACTAACCAGTTGCTGGTACAAAACATGTTCATTAAAGCGATTGAACGTGGCGAAGTGTGTGACCAGCACGATTCAGAA
CACTTGGCAAACTTGTTCCATGGTATTTGTTACTCACTGTTTGTCCAAGCGAACCGTGCAAAAAGTGAAGCGGAACTTAA
GCACCTTGTTAGTTCATACTTAGACATGCTTTGCATTTACAACCGTGAACACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
97.059 |
100 |
0.971 |
| hapR | Vibrio cholerae C6706 |
73.232 |
97.059 |
0.711 |
| hapR | Vibrio cholerae strain A1552 |
73.232 |
97.059 |
0.711 |