Detailed information NTG0168111

Bioinformatically predicted

Overview

• Name: cqsA
• Type: Regulator
• Locus tag: AL542_RS02755
• Genome accession: NZ_CP014055
• Coordinates: 581140..582339 (-)
• Length: 399 a.a.
• NCBI ID: WP_050778560.1
• Uniprot ID: -
• Organism: Grimontia hollisae strain FDAARGOS_111
• Function: induction of competence (predicted from homology) Competence regulation

Genomic Context

Location: 576140..587339

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL542_RS02735 (AL542_02665)	-	577831..578217 (-)	387	WP_236994868.1	NADAR family protein	-
AL542_RS02740 (AL542_18365)	-	578435..578557 (+)	123	WP_005504995.1	UxaA family hydrolase	-
AL542_RS02750 (AL542_02675)	-	578997..581054 (+)	2058	WP_040528899.1	hybrid sensor histidine kinase/response regulator	-
AL542_RS02755 (AL542_02680)	cqsA	581140..582339 (-)	1200	WP_050778560.1	alpha-hydroxyketone-type quorum-sensing autoinducer synthase	Regulator
AL542_RS02760 (AL542_02685)	-	582755..583384 (-)	630	WP_040528898.1	class II aldolase/adducin family protein	-
AL542_RS02765 (AL542_02690)	-	583960..584493 (-)	534	WP_005504989.1	NUDIX domain-containing protein	-
AL542_RS02770 (AL542_02695)	yeiP	584669..585244 (+)	576	WP_005504987.1	elongation factor P-like protein YeiP	-
AL542_RS02775 (AL542_02700)	yegS	585394..586284 (+)	891	WP_005504985.1	lipid kinase YegS	-
AL542_RS02780 (AL542_02705)	trxC	586486..586914 (+)	429	WP_005504981.1	thioredoxin TrxC	-

Sequence

Protein

• Length: 399 a.a.
• Molecular weight: 44013.12 Da
• Isoelectric Point: 5.1480

>NTDB_id=168111 AL542_RS02755 WP_050778560.1 581140..582339(-) (cqsA) [Grimontia hollisae strain FDAARGOS_111]
METPSTPSTSIYKKKLPSFVEARLNSFLRDMTEPYENRRPLPVSSRPGEGAVIMQSNDYLALSFDDDIQTAHLNAIKTTN
ENVVMSAVFLQDAEHKPEFEKRLAEFIGMDGCVLSQSGWTANVGLLQTICEPGTHVYIDFFAHMSLWEGARIAGAQVIPF
MHNSVSNLKRQIKKHGPGIILVDSVYSTIGTVAPLPAICELAKELDCALVVDESHSLGTHGPGGSGLINEMEVRDQVDFV
TTSLAKAFAYRAGAVLGPDNLIIALPFVSFPAIFSSTVLPQEVARLEATLDVIQNSDDKRRRLFEISDVLRAGLKEIGFN
IRSESQIISLECGDEQNTEHVRDFLESKGVFGAVFCSPATPKNKAIIRFSLNADMSYREVDHVLTVCQAAYNHPDLRFY

Nucleotide

• Length: 1200 bp

>NTDB_id=168111 AL542_RS02755 WP_050778560.1 581140..582339(-) (cqsA) [Grimontia hollisae strain FDAARGOS_111]
ATGGAAACCCCATCTACTCCATCTACATCTATATATAAAAAAAAACTCCCTTCTTTTGTCGAGGCTCGTCTGAATTCGTT
TCTGCGCGATATGACAGAGCCTTATGAAAACCGACGGCCACTGCCTGTTAGCAGCCGACCCGGAGAGGGAGCCGTAATCA
TGCAGAGTAATGATTACCTCGCGCTTAGCTTTGATGACGATATTCAAACTGCACATTTGAATGCAATTAAAACGACGAAT
GAAAACGTCGTGATGTCAGCGGTATTCTTACAAGATGCTGAGCATAAGCCGGAGTTTGAAAAGCGCCTGGCTGAATTTAT
CGGCATGGATGGGTGTGTATTATCTCAATCTGGCTGGACGGCGAATGTCGGCTTGCTACAAACCATTTGTGAGCCCGGTA
CTCACGTCTATATTGATTTCTTTGCCCATATGTCATTGTGGGAAGGCGCTCGGATAGCAGGAGCTCAAGTTATCCCTTTC
ATGCACAACAGCGTTTCTAATCTCAAGCGACAAATAAAAAAACATGGTCCCGGCATCATTTTGGTGGATTCGGTTTACAG
CACCATCGGTACTGTTGCACCGCTCCCGGCGATCTGTGAATTGGCCAAAGAACTGGATTGTGCGCTGGTGGTTGATGAAT
CACATTCTTTGGGCACTCATGGTCCTGGCGGTTCGGGTCTGATTAACGAAATGGAGGTACGGGACCAGGTAGATTTTGTT
ACTACCAGCCTTGCTAAGGCATTTGCTTACCGGGCTGGGGCGGTATTGGGTCCGGACAATTTGATCATTGCATTACCGTT
TGTGTCTTTTCCGGCAATTTTCAGTTCTACTGTTTTGCCTCAGGAAGTTGCCCGGCTTGAGGCAACCCTTGATGTGATCC
AAAACAGTGATGACAAGCGAAGGCGGCTTTTTGAAATATCTGATGTCTTGCGTGCGGGGTTGAAGGAGATTGGTTTTAAT
ATTCGCAGTGAATCCCAAATCATCTCCCTAGAGTGCGGTGATGAGCAGAATACGGAACATGTCCGGGACTTTCTGGAAAG
CAAGGGGGTGTTTGGGGCGGTATTTTGTTCACCGGCAACACCGAAGAACAAGGCCATTATCCGTTTCTCATTGAATGCAG
ATATGAGCTACCGGGAAGTGGATCATGTGCTGACTGTTTGTCAGGCAGCATACAACCACCCAGATCTTCGTTTCTATTAA

Domains

Predicted by InterproScan.

• Aminotransferase class I and II (Aminotran_1_2) (74-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cqsA	Vibrio cholerae strain A1552	52.85	96.742	0.511