Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | AL464_RS07560 | Genome accession | NZ_CP014046 |
| Coordinates | 1463283..1463897 (-) | Length | 204 a.a. |
| NCBI ID | WP_005479697.1 | Uniprot ID | - |
| Organism | Vibrio parahaemolyticus strain ATCC 17802 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1458283..1468897
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL464_RS07550 (AL464_07020) | aceF | 1459570..1461459 (+) | 1890 | WP_041955272.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| AL464_RS07555 (AL464_07025) | lpdA | 1461728..1463155 (+) | 1428 | WP_021823119.1 | dihydrolipoyl dehydrogenase | - |
| AL464_RS07560 (AL464_07030) | opaR | 1463283..1463897 (-) | 615 | WP_005479697.1 | transcriptional regulator OpaR | Regulator |
| AL464_RS07565 (AL464_07035) | hpt | 1464216..1464746 (+) | 531 | WP_005479701.1 | hypoxanthine phosphoribosyltransferase | - |
| AL464_RS07570 (AL464_07040) | can | 1464821..1465489 (-) | 669 | WP_005462578.1 | carbonate dehydratase | - |
| AL464_RS07575 (AL464_07045) | - | 1465773..1467443 (+) | 1671 | WP_005493993.1 | SulP family inorganic anion transporter | - |
| AL464_RS07585 (AL464_07050) | - | 1467696..1468613 (+) | 918 | WP_005462584.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23634.94 Da Isoelectric Point: 6.0781
>NTDB_id=167981 AL464_RS07560 WP_005479697.1 1463283..1463897(-) (opaR) [Vibrio parahaemolyticus strain ATCC 17802]
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSE
HLANLFHGICYSLFVQANRFKGEAELKELVSAYLDMLCIYNREH
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSE
HLANLFHGICYSLFVQANRFKGEAELKELVSAYLDMLCIYNREH
Nucleotide
Download Length: 615 bp
>NTDB_id=167981 AL464_RS07560 WP_005479697.1 1463283..1463897(-) (opaR) [Vibrio parahaemolyticus strain ATCC 17802]
ATGGACTCAATTGCAAAGAGACCTAGAACTAGGCTTTCTCCTCTTAAACGTAAGCAACAACTCATGGAAATCGCGTTAGA
AGTATTTGCACGCCGTGGTATTGGCCGTGGAGGTCACGCAGATATTGCTGAAATTGCGCAAGTGTCTGTTGCAACCGTTT
TTAACTACTTCCCAACTCGCGAAGATTTGGTTGATGAAGTTCTCAATCATGTTGTACGTCAGTTCTCGAATTTCCTTTCG
GATAACATCGACCTAGACATACACGCTCGTGAAAACATCGCAAACATCACCAATGCGATGATCGAGCTCGTAAGCCAAGA
TTGTCACTGGCTGAAAGTTTGGTTCGAGTGGAGCGCATCAACTCGTGATGAAGTTTGGCCTCTATTTGTGTCTACCAACC
GCACTAACCAATTATTGGTTCAAAACATGTTCATTAAAGCGATTGAACGCGGTGAAGTGTGTGATCAACACGATTCAGAA
CACTTGGCAAATCTATTCCACGGTATTTGTTACTCGCTGTTCGTACAAGCAAACCGCTTCAAAGGTGAAGCTGAGTTGAA
AGAACTCGTGAGCGCTTACCTAGATATGCTTTGCATCTACAATCGCGAACACTAA
ATGGACTCAATTGCAAAGAGACCTAGAACTAGGCTTTCTCCTCTTAAACGTAAGCAACAACTCATGGAAATCGCGTTAGA
AGTATTTGCACGCCGTGGTATTGGCCGTGGAGGTCACGCAGATATTGCTGAAATTGCGCAAGTGTCTGTTGCAACCGTTT
TTAACTACTTCCCAACTCGCGAAGATTTGGTTGATGAAGTTCTCAATCATGTTGTACGTCAGTTCTCGAATTTCCTTTCG
GATAACATCGACCTAGACATACACGCTCGTGAAAACATCGCAAACATCACCAATGCGATGATCGAGCTCGTAAGCCAAGA
TTGTCACTGGCTGAAAGTTTGGTTCGAGTGGAGCGCATCAACTCGTGATGAAGTTTGGCCTCTATTTGTGTCTACCAACC
GCACTAACCAATTATTGGTTCAAAACATGTTCATTAAAGCGATTGAACGCGGTGAAGTGTGTGATCAACACGATTCAGAA
CACTTGGCAAATCTATTCCACGGTATTTGTTACTCGCTGTTCGTACAAGCAAACCGCTTCAAAGGTGAAGCTGAGTTGAA
AGAACTCGTGAGCGCTTACCTAGATATGCTTTGCATCTACAATCGCGAACACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
100 |
100 |
1 |
| hapR | Vibrio cholerae C6706 |
72.222 |
97.059 |
0.701 |
| hapR | Vibrio cholerae strain A1552 |
72.222 |
97.059 |
0.701 |