Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   WH25_RS02210 Genome accession   NZ_CP017295
Coordinates   445631..447964 (+) Length   777 a.a.
NCBI ID   WP_046164937.1    Uniprot ID   -
Organism   Streptococcus gordonii strain IE35     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 440631..452964
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WH25_RS02190 (WH25_02190) lepB 443075..443677 (-) 603 WP_011999786.1 signal peptidase I -
  WH25_RS02195 (WH25_02195) rnhC 443681..444571 (-) 891 WP_045634572.1 ribonuclease HIII -
  WH25_RS02200 (WH25_02200) - 444722..445027 (+) 306 WP_008808274.1 hypothetical protein -
  WH25_RS02205 (WH25_02205) - 445027..445575 (+) 549 WP_045634571.1 CvpA family protein -
  WH25_RS02210 (WH25_02210) mutS/mutS2 445631..447964 (+) 2334 WP_046164937.1 endonuclease MutS2 Machinery gene
  WH25_RS02215 (WH25_02215) - 447975..448619 (+) 645 WP_046164938.1 GNAT family N-acetyltransferase -
  WH25_RS02220 (WH25_02220) - 448720..450138 (+) 1419 WP_046164939.1 C69 family dipeptidase -
  WH25_RS02225 (WH25_02225) trxA 450223..450537 (+) 315 WP_002898369.1 thioredoxin -
  WH25_RS02230 (WH25_02230) - 450698..451216 (-) 519 WP_045772750.1 DUF4865 family protein -
  WH25_RS02235 (WH25_02235) - 451325..452071 (+) 747 WP_046164940.1 LysR family transcriptional regulator -
  WH25_RS02240 (WH25_02240) - 452171..452578 (+) 408 WP_046164941.1 polyketide cyclase -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87496.08 Da        Isoelectric Point: 5.9343

>NTDB_id=167966 WH25_RS02210 WP_046164937.1 445631..447964(+) (mutS/mutS2) [Streptococcus gordonii strain IE35]
MNTKILETLEFNKIKDLFQGFLQTEQGKLELQVLQPTTKKEAIERAFLEVADMEQILVEDPHFHLAATKDITAISKRLEL
DGDLNIEELLVLKKVLRVSHDLVAFYNDLENVRLQELNRIFENLVDFPAIQGSLLAVNDGGFIESFASEDLGRIRRKIQE
NESKVRDLLQEILKNKGDMLADQVVASRNGRNVLPVKNTYRNRIPGVVHDISASGTTIYIEPRAVVNLNEEISNYKADER
YELLRILQELSAMIRPHAAEIANNAWIIGHLDLVMAKLAFMRERGAVVPALSETQAIQLLQVRHPLIENAVANDLHFGQD
LTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVD
SESLVLLDELGAGTDPQEGAALAIAILEDLRLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTYRFMQGVPG
RSNAFEIARRLGLSELIVSHAQEQTNTDSDVNRIIERLEEQTLESRKRLDNIREVEQENLKFNRALKKLYNEFNREKETE
LNKARLEAQEIVDLALSESESILQNLHAKSSLKPHEIIEAKSQLKKLAPETVDLSKNKVLKQAKKHRAPKVGDDILVTSY
GQRGTLVKQLKDGRWEAQVGLIKMTLEEQEFNLLKAEKEQQPKRKQVNVVKRANTAGPRARLDLRGKRYEEAMKELDEFI
DQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGATIVIFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=167966 WH25_RS02210 WP_046164937.1 445631..447964(+) (mutS/mutS2) [Streptococcus gordonii strain IE35]
ATGAATACAAAAATATTAGAAACTTTAGAATTTAATAAAATAAAAGACTTGTTCCAAGGCTTTTTGCAAACGGAGCAGGG
AAAGTTGGAATTACAAGTTTTACAGCCGACCACAAAAAAAGAGGCAATTGAGAGAGCATTTTTAGAAGTTGCAGATATGG
AGCAGATTTTAGTAGAAGATCCGCATTTTCATTTGGCAGCAACCAAGGATATCACTGCTATTAGCAAGCGTTTGGAGCTT
GATGGTGATCTGAATATCGAGGAATTGCTTGTTTTAAAAAAGGTTTTGCGCGTTTCGCATGACCTGGTTGCTTTTTATAA
TGACTTAGAAAATGTTCGACTTCAAGAATTGAACCGTATTTTTGAAAATTTAGTCGACTTCCCTGCTATTCAAGGGAGTC
TTCTAGCTGTCAACGACGGAGGCTTTATTGAAAGTTTTGCCAGTGAGGATCTGGGGCGAATCCGTCGTAAGATTCAAGAG
AATGAAAGCAAGGTACGAGATCTTTTGCAAGAAATTCTCAAAAACAAGGGAGACATGCTAGCAGATCAGGTAGTAGCCAG
CCGGAATGGCCGCAATGTGCTGCCGGTTAAAAATACCTATCGGAATCGGATTCCAGGAGTGGTGCATGACATTTCTGCCA
GTGGGACGACCATTTATATCGAGCCAAGGGCAGTGGTCAATCTCAATGAGGAAATTTCCAACTACAAGGCGGACGAGCGC
TACGAACTCTTGCGAATTTTGCAAGAACTATCTGCTATGATTCGCCCTCATGCGGCTGAAATTGCTAACAATGCTTGGAT
CATCGGCCATCTTGACTTGGTGATGGCCAAATTGGCCTTTATGAGAGAACGAGGAGCAGTAGTGCCAGCCTTATCCGAGA
CACAAGCCATTCAGTTGCTACAGGTTCGTCATCCCCTGATTGAAAATGCAGTAGCTAATGACCTGCATTTCGGACAAGAC
TTGACAGAGATTGTCATTACTGGGCCAAATACCGGTGGTAAGACCATCATGTTGAAGACCTTGGGGCTAGCTCAGATCAT
GGCTCAGTCAGGTCTGCCGATTTTGGCGGACAAGGGGAGTCGCGTTGGGATTTTCAGTCAGATTTTTGCAGACATTGGGG
ATGAGCAGTCCATTGAGCAGAGCCTGTCGACTTTCTCCAGCCACATGACCAATATCGTCTCTATTTTAGAGCAGGTTGAT
AGCGAGAGTCTGGTTCTGCTGGATGAGCTGGGAGCTGGGACTGACCCTCAGGAGGGAGCGGCTCTGGCTATTGCTATCTT
GGAAGATTTGCGGCTAAGACAGATTAAAACCATGGCGACGACCCACTATCCTGAGCTCAAAGCCTATGGGATTGAGACGG
ACTGGGTGGAAAATGCCAGCATGGAATTTGATACTGATAGTTTGCGACCGACCTATCGCTTTATGCAGGGAGTGCCTGGT
CGTTCCAATGCCTTTGAAATCGCTCGCCGCTTAGGCTTGTCTGAACTTATCGTTAGCCATGCCCAAGAGCAGACCAACAC
AGACAGCGATGTCAATCGGATTATTGAGCGCCTGGAAGAGCAGACGCTGGAAAGTCGCAAGCGCTTGGATAATATCCGCG
AGGTGGAGCAGGAAAATCTCAAATTTAACCGAGCCCTCAAAAAACTTTACAATGAGTTTAACCGAGAAAAAGAAACCGAA
CTCAATAAGGCACGCTTGGAAGCTCAGGAAATCGTTGATTTGGCTCTATCAGAGAGTGAGAGCATTCTCCAAAATCTCCA
TGCTAAGTCCAGTCTCAAACCTCATGAGATTATCGAAGCCAAGTCTCAACTCAAAAAGTTGGCACCAGAAACGGTTGATT
TATCAAAGAATAAGGTGCTCAAGCAGGCTAAGAAACATCGGGCGCCCAAGGTGGGAGACGATATCCTAGTCACTAGCTAT
GGTCAGCGGGGAACCTTGGTCAAGCAGCTCAAGGACGGCCGCTGGGAAGCTCAGGTAGGTCTCATCAAGATGACTCTAGA
GGAACAGGAATTTAATCTTCTCAAGGCTGAAAAAGAGCAACAACCTAAGCGCAAGCAGGTCAATGTGGTCAAGCGAGCTA
ATACTGCTGGACCAAGAGCTAGACTGGATTTACGAGGTAAGCGTTACGAAGAAGCTATGAAAGAGCTAGATGAATTTATC
GATCAGGCCCTTCTTAATAATATGGCTCAGGTAGATATTATCCATGGTATCGGGACCGGGGTCATCCGTGAAGGAGTGAC
TAAATACCTCCGCCGCAACAAGCATGTCAAGTCCTTCGGCTATGCTCCGCAAAATGCTGGCGGTAGCGGTGCAACGATTG
TGATCTTTAAGTAA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(702-777)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-668)

MutS domain V (MutS_V)

(324-505)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.037

100

0.396

Multiple sequence alignment