Detailed information NTG0167891

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: AL543_RS12960
• Genome accession: NZ_CP014043
• Coordinates: 1276582..1280115 (-)
• Length: 1177 a.a.
• NCBI ID: WP_188318497.1
• Uniprot ID: -
• Organism: Vibrio mimicus strain FDAARGOS_112
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1271582..1285115

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL543_RS12945 (AL543_12200)	-	1272047..1273072 (-)	1026	WP_000646277.1	ABC transporter permease	-
AL543_RS12950 (AL543_12205)	-	1273075..1274061 (-)	987	WP_000540341.1	ABC transporter permease	-
AL543_RS12955 (AL543_12210)	-	1274231..1275901 (-)	1671	WP_000880696.1	ABC transporter substrate-binding protein	-
AL543_RS12960 (AL543_12215)	chiS	1276582..1280115 (-)	3534	WP_188318497.1	two-component system sensor histidine kinase ChiS	Regulator
AL543_RS12965 (AL543_12220)	rsmC	1280179..1281201 (-)	1023	WP_061052106.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
AL543_RS12970 (AL543_12225)	-	1281275..1282360 (-)	1086	WP_001290823.1	AI-2E family transporter	-
AL543_RS21800	-	1282397..1282552 (+)	156	WP_000187949.1	hypothetical protein	-
AL543_RS12975 (AL543_12235)	hemL	1282598..1283896 (-)	1299	WP_000167253.1	glutamate-1-semialdehyde 2,1-aminomutase	-
AL543_RS12980 (AL543_12245)	erpA	1284180..1284521 (+)	342	WP_000005742.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1177 a.a.
• Molecular weight: 133278.29 Da
• Isoelectric Point: 6.5830

>NTDB_id=167891 AL543_RS12960 WP_188318497.1 1276582..1280115(-) (chiS) [Vibrio mimicus strain FDAARGOS_112]
MRLCPRFSLDLLVKVKKLVNFVTLGFSYQSPTHAWRSPQSFTKSNALIMFRFYRKQKFKRLQNTLMAAFLALSIIPLTIT
ALFFLHSHSKDLEEQSTSYLVSVRDTKQQQVIDYMMAKESEVMGFVRSELAYASGGRFYGLVNAFQRLDVSIEAAREHAQ
QRYIPGSGDQIKTSVLPQSSSYVGSERYRLLHKRYHWAYLELRKRSDFDDILLVDIEGNVVYSIYKYDNFGTNLLTGKYK
DSSLGSTFKRLEQTVNEQRKTNEDFTPVVISDFVQEDGKQYAWLGAPIIQQGYLHSYAMFRLPSNAITKLIADGNSNPSM
QTILVGQDHRSRTLTSAEVTVEKSKEVVDLALSGKRSVGTYTNTDDEEIIAAYAPINLKSIHWALVVELPEKEAFARVRQ
LEKLFVFAMLTAIVLVVIASHYLSNFITSPLLKLTWAAERVSAGDLDEAMINTERKDEIGRLAVSFERMQRSIREKISLI
KSQNKELENNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAEALVSGANGPLTAAHKYQLDIIISSGQRLA
TLVDDLLDYHKMRYGALDIQKGAVDLSSATRLVLELSNHLLGKKTLRIINQVSEQPVWVSADPQRLEQVLYNLIGNAIKY
TSEGKIVISATYIDDKVRVQVVDTGQGIPAEQLEQIFEPLIQAGRDASRYRQGAGLGLSISRQLIELMNGTLYVSSQPMV
GTTFSFTLPLATQEEIDQARLTELPHFQAPEILDTELPEQSTLPENEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQ
DGHEVLEAIQREKPELLLLDIMMPGMSGYQVCEKLRQTYDHAELPIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELA
ARIVAHLTASKAELRRIENAQLQKELKHRAMVEASLLETQGRLLEQLESAPEAILCVKEGNKVRFANEAAARLFRRTPEQ
LKRSNAEELIAPKYLNIEQEHYCGNIDVYVDDVRQHLSADVLRLPEGSGLQAMYIFNVGGSINAARIFNLETAVEALSSY
AFEGDKDKLQKLKELGGEFTRIADKASGEYQSKQDLMRAVLVEAMTSALNYWENVSGQSKFTFAEQSGLWRVYLDRSTLQ
TRTLDKYLRIETLPKTPRWRTVLNSLDYILEHCKEPGPDRTHIEMQRDKLQKLLTSE

Nucleotide

• Length: 3534 bp

>NTDB_id=167891 AL543_RS12960 WP_188318497.1 1276582..1280115(-) (chiS) [Vibrio mimicus strain FDAARGOS_112]
TTGCGTCTATGCCCACGCTTTAGCTTGGACTTACTTGTCAAAGTAAAAAAACTCGTTAATTTCGTTACTTTAGGTTTTTC
TTATCAATCACCCACTCATGCTTGGCGATCGCCACAGAGTTTCACCAAAAGTAATGCCTTAATTATGTTTAGGTTCTATC
GAAAACAAAAATTCAAGCGCCTGCAAAATACGCTAATGGCGGCATTTCTGGCACTCAGTATTATTCCATTAACCATCACT
GCGCTGTTTTTCCTCCATTCACACAGTAAAGATTTGGAAGAGCAAAGCACCTCTTACCTTGTCTCAGTGCGCGATACCAA
ACAGCAGCAAGTGATTGATTATATGATGGCCAAAGAGTCGGAAGTGATGGGCTTTGTCCGCTCCGAACTCGCTTATGCCA
GTGGTGGTCGCTTTTATGGCTTAGTGAACGCCTTCCAGCGCTTGGATGTCAGCATTGAAGCGGCACGTGAGCATGCCCAA
CAGCGCTATATACCGGGCTCGGGGGATCAAATAAAAACCTCAGTACTGCCACAATCAAGTAGCTATGTGGGCAGTGAACG
CTATCGGCTCCTGCACAAACGTTATCATTGGGCTTATTTAGAACTGCGGAAACGTTCGGACTTTGACGACATATTGCTGG
TAGATATTGAAGGCAACGTTGTTTATTCCATCTATAAATACGACAACTTCGGCACCAACTTATTAACGGGAAAATATAAA
GATTCCAGTCTTGGGAGCACCTTTAAACGCCTCGAGCAAACCGTTAATGAACAGCGCAAGACTAACGAAGATTTCACACC
TGTGGTTATCTCTGACTTTGTGCAAGAAGATGGAAAACAATATGCTTGGCTCGGTGCGCCCATCATTCAACAAGGGTATT
TGCACAGTTACGCTATGTTCCGCCTGCCAAGTAATGCGATCACTAAGCTGATCGCGGATGGCAATAGCAATCCATCGATG
CAAACCATTTTGGTTGGCCAAGATCATCGTTCAAGAACCTTAACTTCCGCTGAAGTGACGGTTGAAAAAAGCAAAGAAGT
GGTCGATTTAGCCTTGTCTGGCAAACGTTCTGTCGGCACTTACACCAATACCGATGATGAAGAGATTATTGCTGCGTACG
CCCCAATTAATCTGAAAAGTATTCATTGGGCGTTAGTAGTAGAATTACCAGAAAAAGAAGCCTTTGCTCGCGTACGTCAG
TTAGAAAAGCTCTTCGTCTTCGCGATGCTGACGGCTATTGTCTTAGTGGTCATCGCTTCCCATTACCTATCCAACTTCAT
TACCTCACCACTGTTGAAACTAACTTGGGCTGCAGAACGAGTCTCGGCGGGAGATCTTGATGAAGCAATGATCAATACCG
AGCGTAAAGATGAAATTGGCCGATTGGCGGTCAGTTTTGAACGCATGCAGCGCTCTATACGCGAAAAAATATCGCTGATC
AAATCGCAAAACAAAGAGCTAGAAAACAATCTCCTGATCATTCGTAAACAAAACGATGAATTGCAGCTCGCGAACAAACT
CAAAGATGAATTCCTCGCGACAACATCGCACGAGTTACGCACTCCCCTGCATGGCATGATCGGGATTGCTGAAGCGTTAG
TCTCTGGTGCCAATGGCCCACTGACCGCCGCTCATAAGTATCAGCTCGACATCATCATCAGTAGTGGACAACGCTTAGCT
ACCTTGGTTGATGACCTGCTGGACTACCACAAAATGCGCTATGGTGCATTGGATATCCAAAAAGGTGCCGTCGATTTATC
GAGTGCAACCCGTTTAGTGCTTGAGCTTTCAAATCATTTGCTCGGCAAAAAAACGCTGCGCATCATTAATCAAGTCTCAG
AGCAACCTGTCTGGGTATCGGCCGATCCACAACGCTTAGAACAAGTTCTGTATAACCTGATCGGTAACGCGATCAAGTAC
ACCTCCGAAGGTAAGATTGTTATCTCAGCAACCTATATTGACGATAAAGTCAGGGTACAAGTCGTGGATACAGGACAAGG
TATTCCTGCTGAGCAGCTTGAACAGATCTTTGAACCTTTAATCCAAGCAGGGCGCGATGCCAGCCGCTATCGTCAAGGTG
CGGGACTCGGACTTTCAATTAGTCGTCAGTTAATTGAGCTAATGAACGGCACTCTTTATGTGAGTAGCCAGCCTATGGTT
GGTACGACATTCAGCTTTACTCTGCCGTTGGCCACACAAGAGGAAATTGACCAAGCTCGTTTGACTGAGTTACCTCATTT
CCAAGCACCGGAAATTTTAGATACCGAACTGCCAGAGCAAAGTACACTGCCTGAAAATGAGCATGGCCCACTTCTGCTTG
TCGCCGATGATGAACCAGTAAACCTAAGAGTCTTGGACAGCTTTTTACGTCTCGAAGGTTATCGCGTTCATACTGCTCAA
GATGGCCATGAAGTGCTTGAAGCCATTCAGCGTGAGAAACCGGAGCTCTTGTTACTAGACATCATGATGCCGGGCATGAG
TGGCTATCAAGTCTGTGAAAAACTAAGACAGACTTACGATCATGCTGAACTCCCTATCATCATGTTGACCGCTCTTAACC
AATCTGATGACCGAGTACGTGGATTTGAAGCTGGGGCGAATGACTATTTGTCCAAACCTTTTAATAAGCAGGAATTGGCT
GCGCGTATCGTTGCCCACCTCACTGCCAGCAAAGCTGAACTAAGGCGCATTGAAAATGCTCAGCTCCAAAAAGAGCTGAA
GCATCGTGCCATGGTAGAAGCCAGCTTACTCGAAACGCAAGGACGCTTGTTAGAGCAATTAGAATCGGCACCAGAAGCGA
TTCTATGCGTCAAAGAAGGCAACAAAGTACGCTTTGCTAATGAAGCGGCCGCCCGTTTATTTAGACGCACACCAGAACAG
CTCAAACGCTCGAATGCTGAAGAGTTGATTGCACCTAAATACCTGAATATTGAGCAAGAACATTACTGTGGCAACATCGA
CGTTTACGTGGACGATGTACGACAGCATCTGTCGGCGGATGTCCTGCGTTTACCGGAAGGCTCTGGATTACAAGCCATGT
ACATTTTCAATGTGGGTGGCAGCATTAACGCAGCGCGCATTTTCAATCTTGAAACCGCTGTAGAGGCGCTCTCTAGTTAC
GCTTTCGAGGGTGACAAAGATAAACTACAGAAGCTTAAAGAACTCGGTGGTGAGTTTACTCGCATAGCTGACAAAGCATC
AGGAGAATATCAATCCAAACAAGATTTGATGCGTGCTGTACTGGTGGAAGCCATGACCAGCGCCCTCAATTATTGGGAAA
ATGTTTCAGGGCAAAGCAAGTTCACGTTTGCAGAACAAAGTGGCCTGTGGCGCGTTTATTTAGACCGTAGCACCTTACAA
ACTCGTACCTTAGACAAGTACTTACGGATTGAGACACTGCCTAAAACACCGCGCTGGAGAACGGTTCTAAACTCGCTTGA
TTACATTCTTGAGCACTGTAAAGAGCCAGGACCAGATCGTACTCATATCGAAATGCAACGCGATAAACTGCAAAAGCTAC
TGACCAGTGAGTGA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (622-731)

• His Kinase A (phospho-acceptor) domain (HisKA) (508-573)

• Response regulator receiver domain (Response_reg) (773-883)

• HAMP domain (HAMP) (423-475)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	95.837	100	0.958