Detailed information
Bioinformatically predicted
Overview
| Name | cqsS | Type | Regulator |
| Locus tag | AL537_RS20530 | Genome accession | NZ_CP014037 |
| Coordinates | 863434..865479 (+) | Length | 681 a.a. |
| NCBI ID | WP_104972490.1 | Uniprot ID | - |
| Organism | Vibrio diabolicus strain FDAARGOS_105 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 858434..870479
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL537_RS20510 (AL537_20505) | dcuC | 858694..860061 (-) | 1368 | WP_005398199.1 | anaerobic C4-dicarboxylate transporter DcuC | - |
| AL537_RS20515 (AL537_20510) | - | 860417..861541 (-) | 1125 | WP_104972488.1 | fatty acid desaturase | - |
| AL537_RS20520 (AL537_20515) | - | 861814..862362 (+) | 549 | WP_005398196.1 | GNAT family N-acetyltransferase | - |
| AL537_RS20525 (AL537_20520) | - | 862449..863066 (-) | 618 | WP_104972489.1 | HAD family phosphatase | - |
| AL537_RS20530 (AL537_20525) | cqsS | 863434..865479 (+) | 2046 | WP_104972490.1 | hybrid sensor histidine kinase/response regulator | Regulator |
| AL537_RS20535 (AL537_20530) | cqsA | 865582..866763 (-) | 1182 | WP_104972491.1 | alpha-hydroxyketone-type quorum-sensing autoinducer synthase | Regulator |
| AL537_RS20540 (AL537_20535) | ylqF | 867103..868047 (-) | 945 | WP_104972492.1 | ribosome biogenesis GTPase YlqF | - |
| AL537_RS20545 (AL537_20540) | - | 868873..869370 (-) | 498 | WP_104972493.1 | ribbon-helix-helix protein, CopG family | - |
Sequence
Protein
Download Length: 681 a.a. Molecular weight: 78094.58 Da Isoelectric Point: 5.3987
>NTDB_id=167762 AL537_RS20530 WP_104972490.1 863434..865479(+) (cqsS) [Vibrio diabolicus strain FDAARGOS_105]
MDSIRKVYQYAEPNLTLVGWMGFLGFPLYYFVWDFVFPQAYENLPLRLFCSLLFFGIIFRNRLSSTWRKYIHIYYQVTIT
ICLPFFFFYMLLMNDWSNVWVMSFMSAIFLHILLVHVTRVMFAQTFAGIGLATFFAWVAKGFHLDLTMDWTHVPIFLFIY
VFGNLFYFRNQVEHEAKVSLAKSFGAGIAHEMRNPLSGLCTSIDVIQSVLPNKKEAEKDQYLMSGEDVTLLREVSEDAMN
IIQSGNETIDLLLTSIDENRVSRSSFQKHSAHSVVEKAIESFSYKRATDRFAISLDARSEFDFLGSDTLLKYVMYNLFKN
AFHHRTSEDFHIHVSMTSTELSNQIVVTDNGAGIAPDVLRNIFQDFYTTGKSGSYGLGLPFCKKVMRSFGGNIECQSQLG
EWSQFTLTFPPITSDIVTEIKNDLTKLKTILTVTNQDILVSKVTDISRFMGFESTILDVNQVLKKKEYEFEFDLIFIDLE
SLDARANQLDRLESLLSFTEARIVYLFEHHPTQRARKAAYEPIWVETQAWLLNTKPTIDRLLYDSSYVSTPTASVALDTS
NKRTIMVVDDNESLRKFTAMLLEKQGFEVIQKEDGQQALDTLEQENVDLILMDIEMPIMDGVEASRRIRSSDKNYASVPI
IAHTGDSSPVTLDKIGSSGMSDFIVKPADKNRLFDKIANWI
MDSIRKVYQYAEPNLTLVGWMGFLGFPLYYFVWDFVFPQAYENLPLRLFCSLLFFGIIFRNRLSSTWRKYIHIYYQVTIT
ICLPFFFFYMLLMNDWSNVWVMSFMSAIFLHILLVHVTRVMFAQTFAGIGLATFFAWVAKGFHLDLTMDWTHVPIFLFIY
VFGNLFYFRNQVEHEAKVSLAKSFGAGIAHEMRNPLSGLCTSIDVIQSVLPNKKEAEKDQYLMSGEDVTLLREVSEDAMN
IIQSGNETIDLLLTSIDENRVSRSSFQKHSAHSVVEKAIESFSYKRATDRFAISLDARSEFDFLGSDTLLKYVMYNLFKN
AFHHRTSEDFHIHVSMTSTELSNQIVVTDNGAGIAPDVLRNIFQDFYTTGKSGSYGLGLPFCKKVMRSFGGNIECQSQLG
EWSQFTLTFPPITSDIVTEIKNDLTKLKTILTVTNQDILVSKVTDISRFMGFESTILDVNQVLKKKEYEFEFDLIFIDLE
SLDARANQLDRLESLLSFTEARIVYLFEHHPTQRARKAAYEPIWVETQAWLLNTKPTIDRLLYDSSYVSTPTASVALDTS
NKRTIMVVDDNESLRKFTAMLLEKQGFEVIQKEDGQQALDTLEQENVDLILMDIEMPIMDGVEASRRIRSSDKNYASVPI
IAHTGDSSPVTLDKIGSSGMSDFIVKPADKNRLFDKIANWI
Nucleotide
Download Length: 2046 bp
>NTDB_id=167762 AL537_RS20530 WP_104972490.1 863434..865479(+) (cqsS) [Vibrio diabolicus strain FDAARGOS_105]
ATGGACTCGATACGTAAGGTTTATCAATATGCAGAACCCAACCTGACTCTCGTTGGTTGGATGGGGTTTCTTGGCTTTCC
GCTGTACTACTTTGTTTGGGATTTTGTTTTCCCACAGGCTTATGAAAACTTGCCGCTCAGATTGTTTTGTTCACTATTGT
TCTTTGGCATCATTTTTAGAAATCGCCTGTCGTCAACGTGGCGAAAATATATCCATATTTACTACCAAGTGACGATAACG
ATCTGCTTACCGTTTTTCTTTTTCTATATGTTACTGATGAATGACTGGTCCAATGTTTGGGTCATGTCCTTTATGTCCGC
GATTTTCTTGCACATTCTATTGGTTCATGTCACAAGAGTTATGTTCGCTCAAACTTTTGCCGGAATAGGTTTAGCGACAT
TCTTTGCTTGGGTGGCGAAAGGGTTTCATCTCGATTTAACAATGGACTGGACGCATGTGCCAATCTTTCTCTTTATTTAT
GTATTTGGCAATTTATTCTACTTTCGGAACCAAGTAGAGCACGAAGCGAAAGTGTCGTTGGCCAAGTCATTCGGGGCCGG
AATTGCGCATGAAATGCGTAACCCTTTAAGTGGCCTTTGCACGTCAATCGATGTTATCCAATCAGTCTTACCCAATAAAA
AAGAAGCCGAGAAAGACCAATATCTGATGAGCGGAGAGGATGTCACCCTGCTGCGCGAAGTTAGTGAGGATGCGATGAAC
ATCATCCAGTCGGGCAACGAGACGATAGATTTACTTCTGACATCGATAGACGAAAACCGTGTCTCGCGATCCAGTTTTCA
AAAGCATTCTGCTCACTCTGTGGTTGAAAAAGCGATTGAAAGCTTTAGTTATAAGCGTGCGACGGATCGCTTTGCTATAT
CCCTAGATGCGAGAAGTGAGTTTGATTTTCTTGGTAGCGATACCTTACTTAAATACGTTATGTATAACCTTTTCAAGAAC
GCCTTCCATCACCGCACATCTGAAGACTTCCACATACATGTGTCCATGACGAGTACGGAGCTCTCAAACCAAATCGTTGT
AACCGATAATGGTGCCGGTATTGCTCCTGATGTCCTACGTAATATATTTCAGGACTTTTACACAACAGGTAAGTCAGGCA
GCTATGGTTTGGGTTTGCCATTTTGTAAAAAAGTGATGCGTTCTTTTGGAGGTAACATTGAATGCCAGTCTCAGCTAGGT
GAGTGGTCTCAGTTCACGTTAACTTTCCCGCCGATCACATCTGATATCGTGACTGAAATTAAAAACGATTTGACCAAACT
CAAAACCATCCTAACGGTGACTAATCAAGATATTCTTGTGTCGAAAGTGACGGACATTAGCCGTTTTATGGGTTTTGAAT
CAACGATCTTAGATGTTAATCAAGTGCTCAAAAAGAAAGAGTATGAGTTCGAATTCGACCTGATTTTTATCGATCTTGAG
AGCTTGGATGCAAGAGCAAACCAATTAGATAGATTAGAATCTCTTCTGTCTTTCACGGAAGCTCGTATCGTTTATCTTTT
TGAGCATCACCCGACACAGAGAGCACGCAAAGCGGCATATGAGCCTATTTGGGTCGAGACTCAAGCCTGGTTATTGAATA
CTAAGCCAACCATTGACCGTCTCTTGTATGATTCAAGCTATGTGTCGACACCAACGGCCTCAGTGGCTTTGGATACGTCA
AATAAACGGACAATTATGGTCGTGGATGATAACGAATCTTTGCGAAAATTTACCGCGATGTTACTCGAAAAGCAGGGCTT
TGAAGTGATTCAGAAAGAAGACGGGCAGCAAGCACTGGATACATTAGAGCAAGAGAACGTTGACCTCATTCTTATGGATA
TCGAGATGCCCATCATGGATGGTGTAGAAGCTTCAAGGCGAATTCGAAGCTCGGATAAAAACTATGCGTCGGTACCTATT
ATTGCGCATACTGGGGATAGCTCACCTGTTACGCTGGACAAAATAGGCTCTTCTGGCATGTCTGACTTTATCGTAAAACC
AGCGGATAAAAATCGCTTATTCGACAAAATCGCAAACTGGATTTAA
ATGGACTCGATACGTAAGGTTTATCAATATGCAGAACCCAACCTGACTCTCGTTGGTTGGATGGGGTTTCTTGGCTTTCC
GCTGTACTACTTTGTTTGGGATTTTGTTTTCCCACAGGCTTATGAAAACTTGCCGCTCAGATTGTTTTGTTCACTATTGT
TCTTTGGCATCATTTTTAGAAATCGCCTGTCGTCAACGTGGCGAAAATATATCCATATTTACTACCAAGTGACGATAACG
ATCTGCTTACCGTTTTTCTTTTTCTATATGTTACTGATGAATGACTGGTCCAATGTTTGGGTCATGTCCTTTATGTCCGC
GATTTTCTTGCACATTCTATTGGTTCATGTCACAAGAGTTATGTTCGCTCAAACTTTTGCCGGAATAGGTTTAGCGACAT
TCTTTGCTTGGGTGGCGAAAGGGTTTCATCTCGATTTAACAATGGACTGGACGCATGTGCCAATCTTTCTCTTTATTTAT
GTATTTGGCAATTTATTCTACTTTCGGAACCAAGTAGAGCACGAAGCGAAAGTGTCGTTGGCCAAGTCATTCGGGGCCGG
AATTGCGCATGAAATGCGTAACCCTTTAAGTGGCCTTTGCACGTCAATCGATGTTATCCAATCAGTCTTACCCAATAAAA
AAGAAGCCGAGAAAGACCAATATCTGATGAGCGGAGAGGATGTCACCCTGCTGCGCGAAGTTAGTGAGGATGCGATGAAC
ATCATCCAGTCGGGCAACGAGACGATAGATTTACTTCTGACATCGATAGACGAAAACCGTGTCTCGCGATCCAGTTTTCA
AAAGCATTCTGCTCACTCTGTGGTTGAAAAAGCGATTGAAAGCTTTAGTTATAAGCGTGCGACGGATCGCTTTGCTATAT
CCCTAGATGCGAGAAGTGAGTTTGATTTTCTTGGTAGCGATACCTTACTTAAATACGTTATGTATAACCTTTTCAAGAAC
GCCTTCCATCACCGCACATCTGAAGACTTCCACATACATGTGTCCATGACGAGTACGGAGCTCTCAAACCAAATCGTTGT
AACCGATAATGGTGCCGGTATTGCTCCTGATGTCCTACGTAATATATTTCAGGACTTTTACACAACAGGTAAGTCAGGCA
GCTATGGTTTGGGTTTGCCATTTTGTAAAAAAGTGATGCGTTCTTTTGGAGGTAACATTGAATGCCAGTCTCAGCTAGGT
GAGTGGTCTCAGTTCACGTTAACTTTCCCGCCGATCACATCTGATATCGTGACTGAAATTAAAAACGATTTGACCAAACT
CAAAACCATCCTAACGGTGACTAATCAAGATATTCTTGTGTCGAAAGTGACGGACATTAGCCGTTTTATGGGTTTTGAAT
CAACGATCTTAGATGTTAATCAAGTGCTCAAAAAGAAAGAGTATGAGTTCGAATTCGACCTGATTTTTATCGATCTTGAG
AGCTTGGATGCAAGAGCAAACCAATTAGATAGATTAGAATCTCTTCTGTCTTTCACGGAAGCTCGTATCGTTTATCTTTT
TGAGCATCACCCGACACAGAGAGCACGCAAAGCGGCATATGAGCCTATTTGGGTCGAGACTCAAGCCTGGTTATTGAATA
CTAAGCCAACCATTGACCGTCTCTTGTATGATTCAAGCTATGTGTCGACACCAACGGCCTCAGTGGCTTTGGATACGTCA
AATAAACGGACAATTATGGTCGTGGATGATAACGAATCTTTGCGAAAATTTACCGCGATGTTACTCGAAAAGCAGGGCTT
TGAAGTGATTCAGAAAGAAGACGGGCAGCAAGCACTGGATACATTAGAGCAAGAGAACGTTGACCTCATTCTTATGGATA
TCGAGATGCCCATCATGGATGGTGTAGAAGCTTCAAGGCGAATTCGAAGCTCGGATAAAAACTATGCGTCGGTACCTATT
ATTGCGCATACTGGGGATAGCTCACCTGTTACGCTGGACAAAATAGGCTCTTCTGGCATGTCTGACTTTATCGTAAAACC
AGCGGATAAAAATCGCTTATTCGACAAAATCGCAAACTGGATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cqsS | Vibrio cholerae strain A1552 |
49.489 |
100 |
0.498 |