Detailed information NTG0167701

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: A4W87_RS03285
• Genome accession: NZ_CP017273
• Coordinates: 643630..645942 (+)
• Length: 770 a.a.
• NCBI ID: WP_076632066.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain TMW 1.1396
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 638630..650942

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W87_RS03260 (A4W87_03220)	-	639428..639823 (+)	396	WP_016265361.1	LPXTG cell wall anchor domain-containing protein	-
A4W87_RS03265 (A4W87_03225)	-	639813..641648 (+)	1836	WP_076632065.1	WxL domain-containing protein	-
A4W87_RS03270 (A4W87_03230)	-	641699..642025 (-)	327	WP_011374977.1	heavy metal-binding domain-containing protein	-
A4W87_RS03275 (A4W87_03235)	-	642042..642407 (-)	366	WP_011374976.1	DUF1304 domain-containing protein	-
A4W87_RS03280 (A4W87_03240)	galE	642493..643485 (-)	993	WP_011374975.1	UDP-glucose 4-epimerase GalE	-
A4W87_RS03285 (A4W87_03245)	recJ	643630..645942 (+)	2313	WP_076632066.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
A4W87_RS03290 (A4W87_03250)	-	645966..646484 (+)	519	WP_011374973.1	adenine phosphoribosyltransferase	-
A4W87_RS03295 (A4W87_03255)	dinR/lexA	646654..647268 (-)	615	WP_011374972.1	transcriptional repressor LexA	Regulator
A4W87_RS03300 (A4W87_03260)	-	647403..647645 (+)	243	WP_016265356.1	DUF896 domain-containing protein	-
A4W87_RS03305 (A4W87_03265)	-	647726..647956 (+)	231	WP_011374970.1	YneF family protein	-
A4W87_RS03310 (A4W87_03270)	-	648098..649843 (+)	1746	WP_056947092.1	ABC transporter transmembrane domain-containing protein	-

Sequence

Protein

• Length: 770 a.a.
• Molecular weight: 84855.67 Da
• Isoelectric Point: 4.5390

>NTDB_id=167701 A4W87_RS03285 WP_076632066.1 643630..645942(+) (recJ) [Latilactobacillus sakei strain TMW 1.1396]
MEAQYEWQLKPVPTEDELQTITKDNPLPKAAAQLLWQRGLRDAEQINDFMNPNVGQLHDPYALHDMQKAIDRIQEAIVNG
EKITIYGDYDADGITSTTLMKETLDDLGADVEVYVPNRFKDGYGPNLEAYKRLIENGTQLIVTVDNGVSGLEPIAYAQEH
GVDVVVTDHHELPSELPNAVAIVHPRHPEGQYPFGELCGVGVAFKVATALLEEIPYDKLDLAAIGTVCDIVPLVDENRTL
VSLGLQQLQNTDRPGLVALCQSAGLEQATLDATNIGFGIGPRLNAIGRLGDATLGVQLLTTLDDEEAVEQAQFIEQQNKK
RQGLVQEITATAMTIAETTENQASATLVIAHEGWHEGVLGIVASHVVEQTGKPTLVLTIDPETGLAKGSGRSVTAFHLFK
ALDAHRELLVHFGGHHMAVGLTAKVDQLALIQAAMNEYAQVNQLDLTGRQPLPVDLALTLADITPDLYQALQQLAPFGSD
NPEPLIELSAPQLADVKQIGADQKHLKMMAVDQQQQLAVLAFNKGALMPDLTAAEDVKLVGSLSENTWRGQTTLQLMVKD
LATSGQVILDQRSNRLTKQLFQSTGDYVFFNDKMREQLQSYLPAGSQALLATDEQVATSQELIVVDEPADLTAFEQFYQQ
QQAAKLSLIFYAKHSAYLEGMPTKQQFATFLVYLRKHPNIEKARLAELAVYLKLQLPLMIFMLQVFFDLGFVRIERGLIT
AELQPEKHALESAPSYQKRLAKIEMEKQLVYSTFTEVKDWLATLPAVANR

Nucleotide

• Length: 2313 bp

>NTDB_id=167701 A4W87_RS03285 WP_076632066.1 643630..645942(+) (recJ) [Latilactobacillus sakei strain TMW 1.1396]
TTGGAAGCACAATATGAATGGCAATTAAAACCAGTACCAACTGAAGATGAATTACAAACAATTACAAAAGACAATCCGCT
ACCCAAGGCTGCGGCCCAACTTTTGTGGCAACGTGGCTTGCGGGATGCAGAGCAGATCAATGATTTTATGAATCCCAATG
TCGGTCAACTTCACGATCCATACGCTTTGCATGATATGCAAAAGGCGATTGATCGAATTCAAGAAGCGATTGTGAACGGC
GAAAAAATTACGATTTATGGCGATTATGACGCGGACGGGATCACAAGTACCACTTTGATGAAGGAAACTTTAGACGACTT
AGGTGCCGATGTTGAAGTCTATGTGCCTAATCGTTTTAAGGATGGCTACGGGCCTAATTTAGAAGCTTATAAACGCTTGA
TTGAAAATGGCACCCAATTAATTGTGACCGTCGATAACGGGGTGAGTGGCTTAGAACCAATCGCTTACGCGCAAGAACAC
GGTGTTGACGTGGTCGTGACCGATCACCATGAATTACCATCAGAATTACCCAACGCAGTGGCGATTGTGCATCCCAGACA
TCCAGAAGGGCAATACCCTTTTGGCGAACTCTGTGGGGTCGGTGTGGCGTTTAAAGTGGCGACTGCTTTATTAGAAGAGA
TTCCTTACGATAAATTAGATTTAGCCGCAATCGGGACGGTTTGTGATATCGTCCCCCTAGTTGATGAAAACCGAACGTTG
GTTAGTTTGGGCTTACAACAATTACAAAATACTGATCGACCAGGCTTGGTTGCATTATGTCAATCAGCCGGCTTAGAACA
AGCGACACTAGATGCCACTAATATTGGTTTTGGGATTGGTCCCCGTTTAAACGCAATTGGTCGTTTAGGCGATGCGACCC
TTGGTGTGCAATTGTTGACGACACTTGATGACGAAGAAGCAGTTGAACAGGCACAGTTTATTGAACAACAAAATAAAAAA
CGCCAAGGGCTAGTGCAAGAAATTACAGCAACGGCAATGACAATTGCTGAAACAACGGAAAATCAAGCGAGTGCAACCTT
AGTTATTGCCCATGAAGGTTGGCACGAAGGGGTGCTAGGGATTGTAGCTAGTCACGTTGTTGAACAGACCGGTAAACCAA
CCTTAGTCTTGACGATTGATCCGGAAACTGGTTTAGCTAAAGGCTCTGGCCGTAGTGTGACAGCTTTTCATTTATTTAAA
GCGTTAGATGCCCACCGTGAATTATTGGTTCATTTTGGTGGCCATCACATGGCAGTTGGCTTGACTGCTAAGGTTGATCA
ATTAGCGCTGATTCAAGCTGCAATGAACGAGTATGCGCAAGTTAATCAGTTAGATTTAACGGGACGCCAACCATTACCAG
TTGATTTGGCGCTGACGTTGGCTGACATTACGCCTGATTTATACCAAGCATTACAACAACTGGCACCGTTTGGCAGTGAT
AATCCAGAACCGTTGATTGAACTTAGTGCGCCCCAGTTAGCCGATGTCAAACAAATTGGTGCTGATCAGAAGCATTTGAA
GATGATGGCGGTTGATCAACAACAACAATTAGCGGTTTTAGCTTTCAATAAAGGGGCTTTGATGCCCGATTTAACTGCCG
CTGAAGATGTGAAATTAGTCGGAAGTTTGAGTGAGAATACTTGGCGTGGCCAGACGACGTTGCAATTAATGGTAAAAGAC
CTTGCCACGAGTGGACAAGTCATACTTGATCAGCGTAGCAATCGCCTGACAAAACAATTATTCCAATCAACAGGCGACTA
CGTCTTTTTTAATGATAAAATGCGCGAGCAACTGCAGTCTTATTTACCGGCAGGGAGTCAGGCGCTGTTAGCGACCGATG
AACAAGTTGCTACTAGCCAAGAGTTAATTGTAGTTGATGAACCGGCTGATTTAACTGCTTTTGAACAATTTTATCAACAA
CAACAGGCCGCTAAATTAAGCTTGATTTTTTATGCTAAACACTCTGCTTACTTAGAAGGAATGCCGACAAAACAGCAGTT
TGCGACTTTCTTAGTCTACTTACGGAAGCACCCAAATATCGAAAAAGCGCGGTTAGCTGAATTAGCGGTGTATTTAAAAT
TACAATTACCGCTAATGATTTTCATGTTGCAGGTGTTTTTTGACCTCGGATTTGTTAGAATAGAACGTGGTCTGATTACG
GCCGAGTTACAACCTGAAAAGCATGCACTGGAAAGTGCACCAAGTTATCAAAAACGATTAGCTAAAATTGAAATGGAAAA
ACAGCTTGTTTATTCAACCTTTACCGAGGTGAAAGACTGGCTAGCAACTCTCCCAGCAGTAGCAAATCGCTAA

Domains

Predicted by InterProScan.

• DHH family (DHH) (82-226)

• DHHA1 domain (DHHA1) (317-438)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (568-761)

• RecJ OB domain (RecJ_OB) (454-560)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	40.21	98.831	0.397
recJ	Bacillus subtilis subsp. subtilis str. 168	37.371	100	0.377