Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | AL536_RS31000 | Genome accession | NZ_CP014035 |
| Coordinates | 123180..123797 (-) | Length | 205 a.a. |
| NCBI ID | WP_024374317.1 | Uniprot ID | M1KD28 |
| Organism | Vibrio fluvialis strain ATCC 33809 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 118180..128797
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL536_RS30990 (AL536_08210) | aceF | 119477..121372 (+) | 1896 | WP_061056146.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| AL536_RS30995 (AL536_08215) | lpdA | 121631..123058 (+) | 1428 | WP_020331989.1 | dihydrolipoyl dehydrogenase | - |
| AL536_RS31000 (AL536_08220) | opaR | 123180..123797 (-) | 618 | WP_024374317.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| AL536_RS31005 (AL536_08225) | hpt | 124118..124645 (+) | 528 | WP_020331991.1 | hypoxanthine phosphoribosyltransferase | - |
| AL536_RS31010 (AL536_08230) | can | 124696..125364 (-) | 669 | WP_020331992.1 | carbonate dehydratase | - |
| AL536_RS31015 (AL536_08235) | - | 125708..126625 (+) | 918 | WP_020331993.1 | ABC transporter ATP-binding protein | - |
| AL536_RS31020 (AL536_08240) | - | 126630..127400 (+) | 771 | WP_020331995.1 | ABC transporter permease | - |
| AL536_RS31025 (AL536_08245) | panC | 127458..128339 (-) | 882 | WP_020331996.1 | pantoate--beta-alanine ligase | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23890.30 Da Isoelectric Point: 6.2346
>NTDB_id=167681 AL536_RS31000 WP_024374317.1 123180..123797(-) (opaR) [Vibrio fluvialis strain ATCC 33809]
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTYVVRQFSNFL
TDNIDLDIHAKENLTNITDEMVKLANEDCHWLKVWFEWSASTRDEVWPLFVSSNRTNQLLVKNMFSKAIERGEVCEQHDP
EDLATLFHGVCYSLFVQANRVRDEGYMRKLVKSYLDMLCIYKRDH
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTYVVRQFSNFL
TDNIDLDIHAKENLTNITDEMVKLANEDCHWLKVWFEWSASTRDEVWPLFVSSNRTNQLLVKNMFSKAIERGEVCEQHDP
EDLATLFHGVCYSLFVQANRVRDEGYMRKLVKSYLDMLCIYKRDH
Nucleotide
Download Length: 618 bp
>NTDB_id=167681 AL536_RS31000 WP_024374317.1 123180..123797(-) (opaR) [Vibrio fluvialis strain ATCC 33809]
ATGGACGCATCTATAGAGAAACGCCCTAGAACACGGCTATCTCCTCAAAAACGTAAACTCCAGTTGATGGAAATCGCGCT
GGAAGTGTTTGCAAAACGAGGCATTGGCCGTGGTGGTCATGCGGATATCGCAGAAATTGCTCAAGTTTCTGTCGCTACCG
TGTTCAACTACTTCCCTACTCGTGAAGATTTGGTCGACGACGTACTGACTTACGTGGTTCGCCAGTTTTCCAACTTTCTC
ACCGACAACATCGATCTCGATATTCACGCGAAAGAGAACCTCACCAACATCACCGATGAAATGGTTAAGCTGGCCAATGA
AGATTGCCACTGGCTGAAAGTGTGGTTTGAATGGAGCGCCTCGACGCGTGACGAAGTATGGCCACTGTTTGTATCCAGTA
ACCGTACCAACCAGTTGCTGGTGAAGAACATGTTCTCGAAAGCCATCGAGCGCGGTGAAGTGTGTGAACAGCACGACCCT
GAAGATCTGGCGACGCTGTTCCACGGTGTCTGCTACTCACTGTTTGTGCAAGCCAACCGCGTTCGCGATGAAGGCTACAT
GCGTAAACTGGTGAAAAGCTACCTGGACATGCTGTGCATCTATAAACGCGATCACTAA
ATGGACGCATCTATAGAGAAACGCCCTAGAACACGGCTATCTCCTCAAAAACGTAAACTCCAGTTGATGGAAATCGCGCT
GGAAGTGTTTGCAAAACGAGGCATTGGCCGTGGTGGTCATGCGGATATCGCAGAAATTGCTCAAGTTTCTGTCGCTACCG
TGTTCAACTACTTCCCTACTCGTGAAGATTTGGTCGACGACGTACTGACTTACGTGGTTCGCCAGTTTTCCAACTTTCTC
ACCGACAACATCGATCTCGATATTCACGCGAAAGAGAACCTCACCAACATCACCGATGAAATGGTTAAGCTGGCCAATGA
AGATTGCCACTGGCTGAAAGTGTGGTTTGAATGGAGCGCCTCGACGCGTGACGAAGTATGGCCACTGTTTGTATCCAGTA
ACCGTACCAACCAGTTGCTGGTGAAGAACATGTTCTCGAAAGCCATCGAGCGCGGTGAAGTGTGTGAACAGCACGACCCT
GAAGATCTGGCGACGCTGTTCCACGGTGTCTGCTACTCACTGTTTGTGCAAGCCAACCGCGTTCGCGATGAAGGCTACAT
GCGTAAACTGGTGAAAAGCTACCTGGACATGCTGTGCATCTATAAACGCGATCACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
81.188 |
98.537 |
0.8 |
| hapR | Vibrio cholerae C6706 |
78.713 |
98.537 |
0.776 |
| hapR | Vibrio cholerae strain A1552 |
78.713 |
98.537 |
0.776 |