Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | AL475_RS17800 | Genome accession | NZ_CP014033 |
| Coordinates | 2054829..2055446 (-) | Length | 205 a.a. |
| NCBI ID | WP_024374317.1 | Uniprot ID | M1KD28 |
| Organism | Vibrio fluvialis strain FDAARGOS_100 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2049829..2060446
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL475_RS17790 (AL475_09830) | aceF | 2051126..2053021 (+) | 1896 | WP_044364128.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| AL475_RS17795 (AL475_09835) | lpdA | 2053280..2054707 (+) | 1428 | WP_020331989.1 | dihydrolipoyl dehydrogenase | - |
| AL475_RS17800 (AL475_09840) | opaR | 2054829..2055446 (-) | 618 | WP_024374317.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| AL475_RS17805 (AL475_09845) | hpt | 2055767..2056294 (+) | 528 | WP_020331991.1 | hypoxanthine phosphoribosyltransferase | - |
| AL475_RS17810 (AL475_09850) | can | 2056345..2057013 (-) | 669 | WP_020331992.1 | carbonate dehydratase | - |
| AL475_RS17815 (AL475_09855) | - | 2057357..2058274 (+) | 918 | WP_020331993.1 | ABC transporter ATP-binding protein | - |
| AL475_RS17820 (AL475_09860) | - | 2058279..2059049 (+) | 771 | WP_020331995.1 | ABC transporter permease | - |
| AL475_RS17825 (AL475_09865) | panC | 2059108..2059989 (-) | 882 | WP_104966497.1 | pantoate--beta-alanine ligase | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23890.30 Da Isoelectric Point: 6.2346
>NTDB_id=167666 AL475_RS17800 WP_024374317.1 2054829..2055446(-) (opaR) [Vibrio fluvialis strain FDAARGOS_100]
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTYVVRQFSNFL
TDNIDLDIHAKENLTNITDEMVKLANEDCHWLKVWFEWSASTRDEVWPLFVSSNRTNQLLVKNMFSKAIERGEVCEQHDP
EDLATLFHGVCYSLFVQANRVRDEGYMRKLVKSYLDMLCIYKRDH
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTYVVRQFSNFL
TDNIDLDIHAKENLTNITDEMVKLANEDCHWLKVWFEWSASTRDEVWPLFVSSNRTNQLLVKNMFSKAIERGEVCEQHDP
EDLATLFHGVCYSLFVQANRVRDEGYMRKLVKSYLDMLCIYKRDH
Nucleotide
Download Length: 618 bp
>NTDB_id=167666 AL475_RS17800 WP_024374317.1 2054829..2055446(-) (opaR) [Vibrio fluvialis strain FDAARGOS_100]
ATGGACGCATCTATAGAGAAACGCCCTAGAACGCGGCTATCTCCTCAAAAACGTAAACTCCAGTTGATGGAAATCGCGCT
GGAAGTGTTTGCAAAACGAGGCATTGGCCGTGGTGGTCATGCGGATATCGCAGAAATTGCTCAAGTTTCTGTCGCCACCG
TGTTCAACTACTTCCCTACTCGTGAAGACTTAGTCGACGACGTACTGACTTACGTGGTTCGCCAGTTTTCCAACTTCCTC
ACGGACAACATCGATCTCGATATCCACGCGAAAGAGAACCTCACCAACATCACCGATGAAATGGTTAAGCTGGCCAATGA
AGATTGCCACTGGCTGAAAGTGTGGTTTGAATGGAGCGCCTCGACGCGTGACGAAGTATGGCCACTGTTTGTCTCCAGTA
ACCGTACCAACCAGTTGCTGGTGAAGAACATGTTCTCGAAAGCCATCGAGCGCGGTGAAGTGTGTGAACAGCACGACCCT
GAAGATCTGGCGACGCTGTTCCACGGTGTCTGCTACTCACTGTTTGTGCAAGCTAACCGCGTTCGCGATGAAGGCTACAT
GCGTAAACTGGTGAAAAGCTACCTGGATATGCTGTGCATCTATAAACGCGATCACTAA
ATGGACGCATCTATAGAGAAACGCCCTAGAACGCGGCTATCTCCTCAAAAACGTAAACTCCAGTTGATGGAAATCGCGCT
GGAAGTGTTTGCAAAACGAGGCATTGGCCGTGGTGGTCATGCGGATATCGCAGAAATTGCTCAAGTTTCTGTCGCCACCG
TGTTCAACTACTTCCCTACTCGTGAAGACTTAGTCGACGACGTACTGACTTACGTGGTTCGCCAGTTTTCCAACTTCCTC
ACGGACAACATCGATCTCGATATCCACGCGAAAGAGAACCTCACCAACATCACCGATGAAATGGTTAAGCTGGCCAATGA
AGATTGCCACTGGCTGAAAGTGTGGTTTGAATGGAGCGCCTCGACGCGTGACGAAGTATGGCCACTGTTTGTCTCCAGTA
ACCGTACCAACCAGTTGCTGGTGAAGAACATGTTCTCGAAAGCCATCGAGCGCGGTGAAGTGTGTGAACAGCACGACCCT
GAAGATCTGGCGACGCTGTTCCACGGTGTCTGCTACTCACTGTTTGTGCAAGCTAACCGCGTTCGCGATGAAGGCTACAT
GCGTAAACTGGTGAAAAGCTACCTGGATATGCTGTGCATCTATAAACGCGATCACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
81.188 |
98.537 |
0.8 |
| hapR | Vibrio cholerae C6706 |
78.713 |
98.537 |
0.776 |
| hapR | Vibrio cholerae strain A1552 |
78.713 |
98.537 |
0.776 |