Detailed information NTG0167653

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: A4W86_RS05750
• Genome accession: NZ_CP017272
• Coordinates: 1156113..1157159 (-)
• Length: 348 a.a.
• NCBI ID: WP_035145546.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain TMW 1.1239
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1151113..1162159

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W86_RS05725 (A4W86_05680)	rpsT	1151175..1151429 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
A4W86_RS05730 (A4W86_05685)	holA	1151497..1152525 (-)	1029	WP_025015735.1	DNA polymerase III subunit delta	-
A4W86_RS05735 (A4W86_05690)	comEC	1152522..1154588 (-)	2067	WP_231953244.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
A4W86_RS05740 (A4W86_05695)	-	1154786..1155274 (-)	489	WP_011374770.1	ComE operon protein 2	-
A4W86_RS05745 (A4W86_05700)	comEA	1155332..1156039 (-)	708	WP_226474265.1	helix-hairpin-helix domain-containing protein	Machinery gene
A4W86_RS05750 (A4W86_05705)	sepM	1156113..1157159 (-)	1047	WP_035145546.1	SepM family pheromone-processing serine protease	Regulator
A4W86_RS05755 (A4W86_05710)	coaD	1157161..1157658 (-)	498	WP_025015732.1	pantetheine-phosphate adenylyltransferase	-
A4W86_RS05760 (A4W86_05715)	rsmD	1157671..1158225 (-)	555	WP_016265217.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
A4W86_RS05765 (A4W86_05720)	-	1158230..1158520 (-)	291	WP_016265218.1	YlbG family protein	-
A4W86_RS05770 (A4W86_05725)	-	1158544..1159632 (-)	1089	WP_025015731.1	CAP-associated domain-containing protein	-
A4W86_RS05775 (A4W86_05730)	-	1159643..1160830 (-)	1188	WP_025015730.1	FtsW/RodA/SpoVE family cell cycle protein	-
A4W86_RS05780 (A4W86_05735)	-	1160839..1161135 (-)	297	WP_025015729.1	DUF1507 family protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38125.90 Da
• Isoelectric Point: 9.5178

>NTDB_id=167653 A4W86_RS05750 WP_035145546.1 1156113..1157159(-) (sepM) [Latilactobacillus sakei strain TMW 1.1239]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAYHTKYLGVYVMSMLDNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLPGTHHPGLGITLTDHSKIETDIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRKIAGTGTMAADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYTIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=167653 A4W86_RS05750 WP_035145546.1 1156113..1157159(-) (sepM) [Latilactobacillus sakei strain TMW 1.1239]
ATGCCCAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACAGTTGGTGTCAGAGGCCCAGTAACACCATTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGTGACGAATTGATGGGCAATGAAGATACCGAAGCTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACCATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGACAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAGTTACCAGGCACGCATCATCCAGGTCTTGGGATTACGT
TAACCGATCACTCTAAGATTGAGACTGATATTCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTAAAATTGCGGGGACCGGCACAAT
GGCTGCTGATGGCACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACCGTCT
TTTTTGCACCTAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATACAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
TCATTAA

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (131-196)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (221-310)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	44.253	100	0.443