Detailed information NTG0167633

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: A4W86_RS03725
• Genome accession: NZ_CP017272
• Coordinates: 747168..749585 (+)
• Length: 805 a.a.
• NCBI ID: WP_016264861.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain TMW 1.1239
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 742168..754585

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W86_RS03695 (A4W86_03665)	recN	742482..744185 (+)	1704	WP_016264857.1	DNA repair protein RecN	Machinery gene
A4W86_RS03700 (A4W86_03670)	-	744244..744567 (-)	324	WP_016264858.1	hypothetical protein	-
A4W86_RS03705 (A4W86_03675)	-	744687..744914 (+)	228	WP_251950951.1	PC4/YdbC family ssDNA-binding protein	-
A4W86_RS03710 (A4W86_03680)	gmk	744987..745598 (+)	612	WP_011374394.1	guanylate kinase	-
A4W86_RS03715 (A4W86_03685)	rpoZ	745603..745860 (+)	258	WP_011374395.1	DNA-directed RNA polymerase subunit omega	-
A4W86_RS03720 (A4W86_03690)	coaBC	745949..747166 (+)	1218	WP_251950911.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	-
A4W86_RS03725 (A4W86_03695)	priA	747168..749585 (+)	2418	WP_016264861.1	primosomal protein N'	Machinery gene
A4W86_RS03730 (A4W86_03700)	fmt	749605..750561 (+)	957	WP_251950912.1	methionyl-tRNA formyltransferase	-
A4W86_RS03735 (A4W86_03705)	rsmB	750551..751894 (+)	1344	WP_016264863.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
A4W86_RS03740 (A4W86_03710)	-	751916..752662 (+)	747	WP_016264864.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
A4W86_RS03745 (A4W86_03715)	pknB	752659..754542 (+)	1884	WP_251950913.1	Stk1 family PASTA domain-containing Ser/Thr kinase	Regulator

Sequence

Protein

• Length: 805 a.a.
• Molecular weight: 90603.18 Da
• Isoelectric Point: 8.0167

>NTDB_id=167633 A4W86_RS03725 WP_016264861.1 747168..749585(+) (priA) [Latilactobacillus sakei strain TMW 1.1239]
MPQIAKVIVDVPTMQTNRPYDYQVPVTLVDVIQPGMRVIIPFGNGDRKIQGFVLQVLDQPSFTGQLKAIEAVVDLTPAVN
PELLSLSDWLAQQTYAFQITCLQTMLPSVMRAKYTKTATLIDEIPADLQASLFNGNDELTFDQNLAPDKLKQLMQLQRQG
KISVTYHVDNRAQVKQLTAIEPALSFEQLEEARMGLRKSAQKQSQLISYLQTLIDQEAPTLLKTILEKTTFTRENIRIGA
EKGWLRQVKVEAYRNPYANAVQPTHKMTLTSEQKTAVDAVVQSASTDASEVFLIEGVTGSGKTEVYLQTIDAVLQQGKTA
LMLVPEIALTPQMVQRVKGRFGDLVAVLHSGLSEGEKYDEWRRIERKEARVVVGARSAIFAPLEDIGVIIMDEEHEASYK
QDESPRYHARDVAIWRSQYHHCPVILGSATPSLESRARAQKDVYHLIRLTQRVNQQALPAVELVDMREAMKVQKASNFSP
ALLAGIKERLQKGEQSVLLLNRRGFSSFIMCRDCGFVLQCPNCDISLTLHMDTHSMKCHYCGHEEAIPRICPSCQSRQIR
YFGTGTQKVEAELQELIPEARILRMDVDTTRKKGAHAKLLKKFGDHEADILLGTQMIAKGLDFPDVTLVGVINADTALGL
PDFRASERTFQLLTQVSGRAGRADKVGQVIVQSYNPENYAIQFAKQHDYEGFYQYEMAVRHRGGYPPYYFTVKVTVSHPE
EALAAKKSFQIAKQMRPILSDQALILGPTPKSIARINNRYFYQIVIKYKQEPQLQAKLAEILETTQIDTRHGFKIGLDNE
PLQFT

Nucleotide

• Length: 2418 bp

>NTDB_id=167633 A4W86_RS03725 WP_016264861.1 747168..749585(+) (priA) [Latilactobacillus sakei strain TMW 1.1239]
ATGCCACAGATTGCTAAAGTAATCGTTGATGTGCCGACAATGCAAACTAATCGGCCATATGATTATCAGGTACCGGTCAC
TTTAGTTGATGTCATTCAACCTGGGATGCGGGTTATTATTCCGTTTGGAAATGGTGATCGTAAGATTCAGGGCTTTGTCT
TGCAAGTTTTAGACCAGCCAAGCTTTACGGGCCAATTAAAGGCAATCGAGGCAGTTGTTGATTTAACGCCAGCGGTTAAC
CCTGAATTACTATCACTTTCAGATTGGTTAGCACAACAGACGTACGCTTTTCAGATCACGTGTCTGCAGACGATGTTACC
CAGTGTGATGCGGGCTAAATATACGAAAACTGCGACGTTAATTGATGAAATTCCAGCGGACTTACAGGCCAGTCTGTTCA
ATGGCAATGACGAGTTGACTTTTGATCAGAATCTAGCGCCTGATAAGTTAAAACAACTCATGCAATTGCAGCGCCAAGGT
AAAATTAGCGTCACTTATCACGTTGATAACCGGGCACAAGTTAAGCAATTAACGGCGATTGAGCCCGCACTGAGTTTTGA
ACAATTGGAAGAAGCACGGATGGGTTTACGAAAGTCAGCCCAGAAGCAAAGCCAATTAATCAGTTATCTGCAAACGCTGA
TTGATCAAGAGGCACCAACTTTATTAAAAACGATTTTAGAAAAAACAACTTTTACGCGGGAAAATATTCGAATCGGTGCG
GAAAAAGGCTGGTTACGCCAAGTTAAGGTGGAAGCTTACCGGAATCCGTACGCTAATGCTGTTCAACCAACCCACAAAAT
GACGCTAACGAGCGAACAAAAAACCGCAGTTGATGCGGTCGTTCAATCCGCATCAACGGATGCCTCAGAAGTATTCTTAA
TTGAAGGTGTCACCGGCAGTGGGAAGACCGAAGTTTATTTACAAACAATTGATGCGGTCTTGCAACAAGGCAAGACCGCA
CTGATGTTAGTCCCTGAAATTGCTTTGACGCCGCAGATGGTGCAACGCGTGAAGGGCCGCTTTGGTGATTTAGTTGCTGT
GTTACATAGTGGCTTGTCTGAAGGTGAGAAATACGACGAATGGCGGCGCATTGAACGCAAAGAAGCGCGCGTGGTCGTCG
GTGCCCGCTCAGCCATTTTTGCGCCACTTGAAGATATTGGCGTGATTATTATGGATGAAGAACATGAAGCCAGTTATAAA
CAAGACGAAAGTCCGCGTTATCATGCACGCGACGTTGCGATTTGGCGGAGTCAGTATCATCACTGCCCCGTCATTTTAGG
CAGCGCCACGCCATCGTTAGAATCCCGCGCTCGGGCGCAAAAAGATGTCTACCATCTGATTCGCCTGACGCAACGGGTGA
ACCAACAAGCCTTACCAGCTGTTGAACTAGTTGATATGCGCGAAGCGATGAAGGTTCAAAAAGCCAGCAACTTTTCACCG
GCGTTATTAGCCGGCATCAAAGAACGGCTGCAAAAGGGCGAACAAAGTGTGTTACTCCTAAATCGTCGCGGTTTTTCATC
ATTTATCATGTGTCGGGATTGCGGGTTTGTCTTGCAGTGTCCCAACTGTGATATTTCGTTGACGTTACACATGGATACGC
ATTCGATGAAATGCCATTATTGTGGGCACGAAGAAGCCATTCCTAGGATTTGCCCTAGCTGTCAGAGTCGCCAAATTCGT
TATTTTGGGACTGGCACGCAAAAAGTCGAAGCTGAATTACAAGAATTAATCCCTGAAGCACGGATTTTGCGGATGGACGT
TGATACGACTCGGAAAAAAGGCGCGCATGCTAAATTATTGAAAAAATTTGGTGATCACGAAGCTGATATCTTATTAGGGA
CGCAGATGATTGCCAAAGGCTTAGATTTCCCAGATGTAACGTTAGTCGGGGTGATCAACGCTGATACAGCTTTGGGTTTA
CCGGATTTTCGGGCGAGTGAGCGGACTTTCCAATTATTAACGCAGGTTAGTGGTCGTGCGGGTCGTGCGGATAAGGTGGG
GCAAGTGATTGTTCAATCTTATAATCCCGAGAATTACGCGATTCAATTTGCTAAACAGCACGATTATGAAGGATTTTATC
AATATGAAATGGCGGTGCGCCACCGTGGCGGCTATCCGCCTTATTACTTTACGGTGAAGGTGACGGTTAGCCACCCTGAA
GAAGCACTTGCCGCAAAGAAGAGTTTTCAAATTGCCAAACAGATGCGACCGATTTTATCCGACCAAGCACTGATTCTCGG
GCCCACCCCGAAATCAATTGCGCGGATTAATAATCGTTATTTTTACCAAATTGTGATTAAATATAAACAGGAACCACAAC
TTCAGGCTAAATTAGCCGAAATACTAGAGACCACCCAAATCGATACTCGTCACGGGTTTAAGATTGGGCTGGATAATGAA
CCTCTACAATTTACTTAA

Domains

Predicted by InterProScan.

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (520-545)

• Type III restriction enzyme, res subunit (ResIII) (266-432)

• Primosomal protein N C-terminal domain (PriA_C) (707-801)

• Helicase conserved C-terminal domain (Helicase_C) (562-663)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (6-107)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	51.792	100	0.52