Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AL510_RS05445 | Genome accession | NZ_CP014027 |
| Coordinates | 1065309..1065800 (+) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain FDAARGOS_149 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1060309..1070800
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL510_RS05415 (AL510_05240) | - | 1061599..1062099 (+) | 501 | WP_015055998.1 | phosphatase PAP2 family protein | - |
| AL510_RS05420 (AL510_05245) | trxA | 1062180..1062494 (+) | 315 | WP_001162959.1 | thioredoxin | - |
| AL510_RS05425 (AL510_05250) | - | 1062546..1063133 (-) | 588 | WP_010922631.1 | helix-turn-helix domain-containing protein | - |
| AL510_RS05430 (AL510_05255) | mutY | 1063209..1064363 (-) | 1155 | WP_015055997.1 | A/G-specific adenine glycosylase | - |
| AL510_RS05435 (AL510_05260) | - | 1064531..1064824 (+) | 294 | WP_002983113.1 | hypothetical protein | - |
| AL510_RS05440 (AL510_05265) | rpsF | 1064997..1065287 (+) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| AL510_RS05445 (AL510_05270) | ssb | 1065309..1065800 (+) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| AL510_RS05450 (AL510_05275) | rpsR | 1065965..1066204 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| AL510_RS05455 (AL510_05280) | - | 1066337..1066993 (-) | 657 | WP_010922629.1 | DUF1129 domain-containing protein | - |
| AL510_RS05460 (AL510_05285) | - | 1067126..1068070 (-) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=167522 AL510_RS05445 WP_002983122.1 1065309..1065800(+) (ssb) [Streptococcus pyogenes strain FDAARGOS_149]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=167522 AL510_RS05445 WP_002983122.1 1065309..1065800(+) (ssb) [Streptococcus pyogenes strain FDAARGOS_149]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |