Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   AL501_RS07940 Genome accession   NZ_CP014023
Coordinates   1631737..1632402 (-) Length   221 a.a.
NCBI ID   WP_062078188.1    Uniprot ID   -
Organism   Staphylococcus lugdunensis strain FDAARGOS_143     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1626737..1637402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AL501_RS07915 (AL501_07655) - 1626927..1627406 (-) 480 WP_062078184.1 DUF4064 domain-containing protein -
  AL501_RS07920 (AL501_07660) - 1627493..1627942 (-) 450 WP_002478516.1 DUF4064 domain-containing protein -
  AL501_RS07925 (AL501_07665) - 1627984..1629945 (-) 1962 WP_237450131.1 FtsX-like permease family protein -
  AL501_RS07930 (AL501_07670) - 1629968..1630717 (-) 750 WP_002478514.1 ABC transporter ATP-binding protein -
  AL501_RS07935 (AL501_07675) braS 1630823..1631731 (-) 909 WP_037545648.1 sensor histidine kinase Regulator
  AL501_RS07940 (AL501_07680) braR 1631737..1632402 (-) 666 WP_062078188.1 response regulator transcription factor Regulator
  AL501_RS12980 - 1632618..1632722 (-) 105 Protein_1498 hypothetical protein -
  AL501_RS07950 (AL501_07690) - 1632941..1634389 (+) 1449 WP_002478511.1 alkaline phosphatase -
  AL501_RS07955 (AL501_07695) wecB 1634575..1635714 (-) 1140 WP_062078190.1 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase -
  AL501_RS07960 (AL501_07700) - 1635757..1637028 (-) 1272 WP_062078192.1 nucleotide sugar dehydrogenase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25784.70 Da        Isoelectric Point: 4.6843

>NTDB_id=167419 AL501_RS07940 WP_062078188.1 1631737..1632402(-) (braR) [Staphylococcus lugdunensis strain FDAARGOS_143]
MRIMIVEDDVVIRESLAGELMKWNYDVVAVDTFDDIVSWFVKYEPDLVLLDINLPTLNGFHWCQEIRKSSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLTVNHNETTVRDCKLIIDEATLYYKEESVHLSFTELQIIK
MLFDNQGKYVSRTALIEKCWESEHFIDDNTLAVNMTRLRKKLNSIGLEDFIETKKNIGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=167419 AL501_RS07940 WP_062078188.1 1631737..1632402(-) (braR) [Staphylococcus lugdunensis strain FDAARGOS_143]
ATGAGGATTATGATTGTTGAGGATGATGTTGTGATTCGCGAGAGTTTGGCTGGTGAACTGATGAAGTGGAATTATGATGT
GGTTGCTGTAGATACCTTTGATGATATTGTGTCTTGGTTCGTAAAGTATGAACCAGATTTAGTGTTGTTGGACATTAATT
TACCTACATTGAATGGATTTCACTGGTGCCAAGAAATTCGCAAATCGTCAAATGTACCAATTATTTTTATTAGCTCACGC
ACGGATAATATGGATCAGATTATGGCGATACAAATGGGTGGAGATGACTTTATAGAAAAACCATTTAATCTGTCATTGAC
CGTAACAAAGATTCAAGCTTTGCTTCGTCGAACTTATGATTTAACTGTGAATCATAATGAAACGACAGTTCGTGACTGTA
AGTTGATTATTGATGAAGCAACGCTTTATTACAAAGAAGAATCGGTACATTTATCATTTACAGAGTTACAAATTATTAAA
ATGCTGTTTGATAATCAAGGTAAATATGTCAGTCGCACAGCGTTAATTGAAAAATGCTGGGAGTCTGAACACTTTATTGA
TGACAATACGCTTGCGGTAAATATGACACGCTTACGCAAAAAACTTAATTCTATAGGGCTTGAAGATTTTATTGAAACAA
AAAAGAATATAGGATATAAGGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

76.471

100

0.765

Multiple sequence alignment