Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   AL501_RS07935 Genome accession   NZ_CP014023
Coordinates   1630823..1631731 (-) Length   302 a.a.
NCBI ID   WP_037545648.1    Uniprot ID   -
Organism   Staphylococcus lugdunensis strain FDAARGOS_143     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1625823..1636731
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AL501_RS07910 (AL501_07650) - 1625980..1626654 (-) 675 WP_002478518.1 DUF4064 domain-containing protein -
  AL501_RS07915 (AL501_07655) - 1626927..1627406 (-) 480 WP_062078184.1 DUF4064 domain-containing protein -
  AL501_RS07920 (AL501_07660) - 1627493..1627942 (-) 450 WP_002478516.1 DUF4064 domain-containing protein -
  AL501_RS07925 (AL501_07665) - 1627984..1629945 (-) 1962 WP_237450131.1 FtsX-like permease family protein -
  AL501_RS07930 (AL501_07670) - 1629968..1630717 (-) 750 WP_002478514.1 ABC transporter ATP-binding protein -
  AL501_RS07935 (AL501_07675) braS 1630823..1631731 (-) 909 WP_037545648.1 sensor histidine kinase Regulator
  AL501_RS07940 (AL501_07680) braR 1631737..1632402 (-) 666 WP_062078188.1 response regulator transcription factor Regulator
  AL501_RS12980 - 1632618..1632722 (-) 105 Protein_1498 hypothetical protein -
  AL501_RS07950 (AL501_07690) - 1632941..1634389 (+) 1449 WP_002478511.1 alkaline phosphatase -
  AL501_RS07955 (AL501_07695) wecB 1634575..1635714 (-) 1140 WP_062078190.1 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase -

Sequence

Protein


Download         Length: 302 a.a.        Molecular weight: 35305.88 Da        Isoelectric Point: 7.1984

>NTDB_id=167418 AL501_RS07935 WP_037545648.1 1630823..1631731(-) (braS) [Staphylococcus lugdunensis strain FDAARGOS_143]
MTTFFDTIKRELIITAMALVVFLVIFFVFNLPYYAYFLGSGIMLFIMVIYWFIALSEFKKQQRLTSQLKVLEQEVQQLRS
KQTQYQNDIESYFLTWVHQIKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNHETDMSFTKVTVNELV
KPLIMKYSIQFIDQHTRIHYDRSDEEVLTDVQWASIMIEQILNNALKYARGKDIWLTFDKDINVLSIKDNGVGISTADLP
KIFDKGYSGYNGRLNEQSTGIGLFIVKHISNHIHHQVEVDSKLGQGTTFKIYFPKVDKMNEL

Nucleotide


Download         Length: 909 bp        

>NTDB_id=167418 AL501_RS07935 WP_037545648.1 1630823..1631731(-) (braS) [Staphylococcus lugdunensis strain FDAARGOS_143]
ATGACAACGTTCTTTGACACAATTAAGCGTGAACTGATCATCACCGCAATGGCATTAGTTGTTTTTTTAGTAATCTTTTT
TGTCTTTAATTTGCCCTACTATGCCTACTTTTTAGGAAGTGGCATTATGTTATTTATCATGGTTATTTATTGGTTTATCG
CATTGAGCGAGTTTAAAAAACAACAACGATTGACATCTCAACTTAAAGTGTTAGAACAAGAAGTTCAACAATTAAGAAGC
AAGCAAACGCAATACCAAAATGACATCGAAAGCTATTTTCTTACTTGGGTACATCAAATTAAAACACCGATCACTGCCTC
CAAACTATTACTCGAACGTAATGAAGACAATGTTGTTAACCGTGTCCGACAAGAAATAATTCAAATTGATAATTACACTA
GTTTAGCTTTAAGCTATTTAAAATTAATGAATCATGAAACTGACATGAGCTTTACTAAAGTAACTGTCAATGAATTGGTT
AAGCCATTAATAATGAAATATTCAATACAATTTATCGATCAACATACACGTATACATTATGATCGCTCAGATGAAGAAGT
ATTGACAGATGTGCAATGGGCTTCCATTATGATAGAGCAAATTTTGAATAATGCACTAAAATATGCTCGTGGTAAAGATA
TTTGGTTAACTTTTGATAAAGATATAAACGTACTGTCTATCAAAGATAATGGTGTGGGTATTAGTACTGCTGATTTACCG
AAAATTTTTGATAAAGGTTATTCTGGTTATAATGGTCGTTTAAATGAGCAATCAACTGGTATTGGATTGTTTATAGTAAA
ACATATATCGAATCATATTCATCATCAAGTAGAAGTAGATTCTAAGCTAGGTCAAGGTACGACATTTAAGATTTATTTTC
CTAAGGTAGATAAAATGAATGAACTATAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(196-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

58.904

96.689

0.57

Multiple sequence alignment