Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AL501_RS04965 | Genome accession | NZ_CP014023 |
| Coordinates | 1005945..1006346 (-) | Length | 133 a.a. |
| NCBI ID | WP_002461219.1 | Uniprot ID | A0A853V538 |
| Organism | Staphylococcus lugdunensis strain FDAARGOS_143 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1000945..1011346
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL501_RS04940 (AL501_04865) | thiE | 1001421..1002059 (-) | 639 | WP_002461213.1 | thiamine phosphate synthase | - |
| AL501_RS04945 (AL501_04870) | thiM | 1002062..1002850 (-) | 789 | WP_037544998.1 | hydroxyethylthiazole kinase | - |
| AL501_RS04950 (AL501_04875) | thiD | 1002843..1003664 (-) | 822 | WP_037543574.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AL501_RS04955 (AL501_04880) | tenA | 1003669..1004346 (-) | 678 | WP_002461217.1 | thiaminase II | - |
| AL501_RS04960 (AL501_04885) | - | 1004759..1005466 (-) | 708 | WP_062077890.1 | transglycosylase family protein | - |
| AL501_RS04965 (AL501_04890) | ssb | 1005945..1006346 (-) | 402 | WP_002461219.1 | single-stranded DNA-binding protein | Machinery gene |
| AL501_RS04970 (AL501_04895) | - | 1006535..1006987 (+) | 453 | WP_002478966.1 | YwpF-like family protein | - |
| AL501_RS04975 (AL501_04900) | fabZ | 1007384..1007824 (-) | 441 | WP_062077892.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AL501_RS04980 (AL501_04905) | murA | 1007861..1009126 (-) | 1266 | WP_002461223.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| AL501_RS04985 (AL501_04910) | - | 1009290..1009523 (-) | 234 | WP_002478965.1 | DUF1146 family protein | - |
| AL501_RS04990 (AL501_04915) | - | 1009661..1010062 (-) | 402 | WP_002461226.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 133 a.a. Molecular weight: 15388.56 Da Isoelectric Point: 6.7151
>NTDB_id=167415 AL501_RS04965 WP_002461219.1 1005945..1006346(-) (ssb) [Staphylococcus lugdunensis strain FDAARGOS_143]
MLNKIVIVGRLTKDAQIYEKEEVKIATFCVATERNYKDDNNEQIVDYILCKAYGRTATNIEKYTSQGSLVGITGQMRSRK
YTKDQQTHFVTELYVETIKFMSSKGKTHEILEEHPTTNIQPFSVDEMKLLNIE
MLNKIVIVGRLTKDAQIYEKEEVKIATFCVATERNYKDDNNEQIVDYILCKAYGRTATNIEKYTSQGSLVGITGQMRSRK
YTKDQQTHFVTELYVETIKFMSSKGKTHEILEEHPTTNIQPFSVDEMKLLNIE
Nucleotide
Download Length: 402 bp
>NTDB_id=167415 AL501_RS04965 WP_002461219.1 1005945..1006346(-) (ssb) [Staphylococcus lugdunensis strain FDAARGOS_143]
ATGTTAAATAAAATCGTAATCGTTGGACGATTAACTAAAGATGCCCAAATATACGAGAAAGAGGAGGTTAAAATTGCTAC
ATTTTGTGTGGCTACGGAAAGAAATTATAAAGATGATAACAACGAGCAAATCGTAGATTATATTCTATGTAAAGCATATG
GTAGGACTGCTACCAACATTGAAAAGTATACCAGTCAGGGATCATTGGTTGGTATTACAGGTCAAATGCGCTCAAGAAAG
TATACTAAAGACCAACAAACACATTTTGTTACAGAATTATACGTAGAAACTATTAAATTCATGTCCTCTAAAGGCAAAAC
ACACGAAATCCTCGAAGAACATCCAACTACTAATATTCAACCTTTTTCAGTTGATGAAATGAAACTCTTAAATATCGAAT
AA
ATGTTAAATAAAATCGTAATCGTTGGACGATTAACTAAAGATGCCCAAATATACGAGAAAGAGGAGGTTAAAATTGCTAC
ATTTTGTGTGGCTACGGAAAGAAATTATAAAGATGATAACAACGAGCAAATCGTAGATTATATTCTATGTAAAGCATATG
GTAGGACTGCTACCAACATTGAAAAGTATACCAGTCAGGGATCATTGGTTGGTATTACAGGTCAAATGCGCTCAAGAAAG
TATACTAAAGACCAACAAACACATTTTGTTACAGAATTATACGTAGAAACTATTAAATTCATGTCCTCTAAAGGCAAAAC
ACACGAAATCCTCGAAGAACATCCAACTACTAATATTCAACCTTTTTCAGTTGATGAAATGAAACTCTTAAATATCGAAT
AA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
69.697 |
99.248 |
0.692 |
| ssb | Staphylococcus aureus MW2 |
68.939 |
99.248 |
0.684 |