Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | AL533_RS19105 | Genome accession | NZ_CP014019 |
| Coordinates | 3987088..3987570 (+) | Length | 160 a.a. |
| NCBI ID | WP_004884685.1 | Uniprot ID | A0A1V0YN91 |
| Organism | Acinetobacter nosocomialis strain FDAARGOS_129 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3982088..3992570
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL533_RS19665 | - | 3982891..3983076 (+) | 186 | Protein_3712 | hypothetical protein | - |
| AL533_RS19100 (AL533_19100) | - | 3984106..3987075 (+) | 2970 | Protein_3713 | PilC/PilY family type IV pilus protein | - |
| AL533_RS19105 (AL533_19105) | pilY2 | 3987088..3987570 (+) | 483 | WP_004884685.1 | type IV pilin protein | Machinery gene |
| AL533_RS19110 (AL533_19110) | pilE | 3987567..3987992 (+) | 426 | WP_016803889.1 | type IV pilin protein | Machinery gene |
| AL533_RS19115 (AL533_19115) | rpsP | 3988139..3988390 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AL533_RS19120 (AL533_19120) | rimM | 3988410..3988958 (+) | 549 | WP_004711694.1 | ribosome maturation factor RimM | - |
| AL533_RS19125 (AL533_19125) | trmD | 3989005..3989760 (+) | 756 | WP_002051760.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AL533_RS19130 (AL533_19130) | rplS | 3989976..3990344 (+) | 369 | WP_002051668.1 | 50S ribosomal protein L19 | - |
| AL533_RS19135 (AL533_19135) | - | 3990396..3991337 (-) | 942 | WP_080593661.1 | lipase family alpha/beta hydrolase | - |
| AL533_RS19140 (AL533_19140) | - | 3991452..3992486 (-) | 1035 | WP_016803887.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17498.71 Da Isoelectric Point: 9.1549
>NTDB_id=167332 AL533_RS19105 WP_004884685.1 3987088..3987570(+) (pilY2) [Acinetobacter nosocomialis strain FDAARGOS_129]
MSKYYNLKFNRGFTLIELMVTLLTLAILVAIAVPSYQSYARRATASAAKSEILKLAERLEQHKSRNFTYRGFTTTSVTLT
RGGYTIQITDDTTAGNLLTSSAANGQTWVIRATTTDSRNLNFIAKNSGLRCQSLTATAVDNDCGGTTTCNTCEANSESWQ
MSKYYNLKFNRGFTLIELMVTLLTLAILVAIAVPSYQSYARRATASAAKSEILKLAERLEQHKSRNFTYRGFTTTSVTLT
RGGYTIQITDDTTAGNLLTSSAANGQTWVIRATTTDSRNLNFIAKNSGLRCQSLTATAVDNDCGGTTTCNTCEANSESWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=167332 AL533_RS19105 WP_004884685.1 3987088..3987570(+) (pilY2) [Acinetobacter nosocomialis strain FDAARGOS_129]
ATGAGTAAATACTATAATTTGAAGTTCAATCGGGGTTTTACTCTGATTGAACTTATGGTCACTCTTCTTACTTTAGCTAT
TCTTGTTGCTATTGCTGTTCCTTCTTATCAAAGTTATGCCCGTAGAGCTACCGCATCTGCCGCTAAGAGTGAGATTTTAA
AATTAGCTGAGCGATTGGAGCAGCATAAGTCTAGAAATTTTACCTATAGGGGATTTACCACAACCTCTGTAACGTTAACT
CGTGGGGGGTATACGATTCAGATCACTGATGATACGACTGCTGGTAATTTATTAACGAGTTCTGCTGCGAATGGGCAGAC
ATGGGTGATTAGAGCGACTACTACAGATTCCAGAAATCTTAATTTTATTGCTAAAAACTCAGGTTTACGTTGCCAGAGCT
TAACAGCTACTGCTGTTGATAATGATTGTGGTGGAACAACTACATGTAACACATGTGAAGCAAATAGTGAGAGTTGGCAG
TGA
ATGAGTAAATACTATAATTTGAAGTTCAATCGGGGTTTTACTCTGATTGAACTTATGGTCACTCTTCTTACTTTAGCTAT
TCTTGTTGCTATTGCTGTTCCTTCTTATCAAAGTTATGCCCGTAGAGCTACCGCATCTGCCGCTAAGAGTGAGATTTTAA
AATTAGCTGAGCGATTGGAGCAGCATAAGTCTAGAAATTTTACCTATAGGGGATTTACCACAACCTCTGTAACGTTAACT
CGTGGGGGGTATACGATTCAGATCACTGATGATACGACTGCTGGTAATTTATTAACGAGTTCTGCTGCGAATGGGCAGAC
ATGGGTGATTAGAGCGACTACTACAGATTCCAGAAATCTTAATTTTATTGCTAAAAACTCAGGTTTACGTTGCCAGAGCT
TAACAGCTACTGCTGTTGATAATGATTGTGGTGGAACAACTACATGTAACACATGTGAAGCAAATAGTGAGAGTTGGCAG
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
83.75 |
100 |
0.838 |
| comE | Acinetobacter baylyi ADP1 |
37.209 |
100 |
0.4 |