Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | AL533_RS19080 | Genome accession | NZ_CP014019 |
| Coordinates | 3980054..3980527 (+) | Length | 157 a.a. |
| NCBI ID | WP_016803890.1 | Uniprot ID | A0A1V0YNQ0 |
| Organism | Acinetobacter nosocomialis strain FDAARGOS_129 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3975054..3985527
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL533_RS19055 (AL533_19055) | - | 3975518..3977623 (-) | 2106 | WP_004711681.1 | RelA/SpoT family protein | - |
| AL533_RS19060 (AL533_19060) | - | 3977663..3977793 (-) | 131 | Protein_3704 | hypothetical protein | - |
| AL533_RS19065 (AL533_19065) | rpoZ | 3977832..3978110 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| AL533_RS19070 (AL533_19070) | gmk | 3978183..3978812 (-) | 630 | WP_016803891.1 | guanylate kinase | - |
| AL533_RS19075 (AL533_19075) | ispH | 3978935..3979885 (+) | 951 | WP_002051768.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| AL533_RS19080 (AL533_19080) | fimU | 3980054..3980527 (+) | 474 | WP_016803890.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| AL533_RS19085 (AL533_19085) | pilV | 3980521..3981081 (+) | 561 | WP_079377028.1 | type IV pilus modification protein PilV | Machinery gene |
| AL533_RS19090 (AL533_19090) | pilW | 3981081..3982079 (+) | 999 | WP_004884688.1 | PilW family protein | Machinery gene |
| AL533_RS19095 (AL533_19095) | pilX | 3982076..3982891 (+) | 816 | WP_004711686.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| AL533_RS19665 | - | 3982891..3983076 (+) | 186 | Protein_3712 | hypothetical protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16856.44 Da Isoelectric Point: 9.3359
>NTDB_id=167328 AL533_RS19080 WP_016803890.1 3980054..3980527(+) (fimU) [Acinetobacter nosocomialis strain FDAARGOS_129]
MRGITPQEGFTLVELIVTIAVMAIIAMMAAPSMSNLLESKRLDTNQRDLISTLSEAKSQAVLGRQNVSVNLNSAASNTAT
LLNWQPTSNNTLTLKNIAADNTQSSLAITTLTFNANGVVSNITQDALISICNSRINKKKNFILTKLGALVFKAEETC
MRGITPQEGFTLVELIVTIAVMAIIAMMAAPSMSNLLESKRLDTNQRDLISTLSEAKSQAVLGRQNVSVNLNSAASNTAT
LLNWQPTSNNTLTLKNIAADNTQSSLAITTLTFNANGVVSNITQDALISICNSRINKKKNFILTKLGALVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=167328 AL533_RS19080 WP_016803890.1 3980054..3980527(+) (fimU) [Acinetobacter nosocomialis strain FDAARGOS_129]
ATGAGGGGAATTACTCCGCAAGAAGGGTTCACCTTAGTGGAACTCATCGTAACAATTGCAGTCATGGCTATTATTGCAAT
GATGGCTGCGCCGTCTATGTCAAATTTATTAGAAAGTAAACGTTTAGATACTAATCAAAGAGATTTAATTAGCACTCTAT
CTGAGGCGAAAAGTCAGGCTGTGCTTGGTCGTCAGAATGTTTCAGTTAATTTGAATTCAGCGGCTTCTAATACGGCCACT
TTATTAAATTGGCAACCTACTTCTAACAACACCCTAACGCTAAAAAATATAGCTGCTGATAATACCCAAAGTTCTTTAGC
TATCACTACTTTAACATTTAACGCAAATGGAGTTGTGAGTAATATTACTCAGGATGCACTTATATCTATTTGTAATTCAA
GAATAAATAAAAAGAAAAATTTTATACTTACAAAACTTGGAGCTTTGGTTTTTAAAGCTGAGGAGACATGCTAA
ATGAGGGGAATTACTCCGCAAGAAGGGTTCACCTTAGTGGAACTCATCGTAACAATTGCAGTCATGGCTATTATTGCAAT
GATGGCTGCGCCGTCTATGTCAAATTTATTAGAAAGTAAACGTTTAGATACTAATCAAAGAGATTTAATTAGCACTCTAT
CTGAGGCGAAAAGTCAGGCTGTGCTTGGTCGTCAGAATGTTTCAGTTAATTTGAATTCAGCGGCTTCTAATACGGCCACT
TTATTAAATTGGCAACCTACTTCTAACAACACCCTAACGCTAAAAAATATAGCTGCTGATAATACCCAAAGTTCTTTAGC
TATCACTACTTTAACATTTAACGCAAATGGAGTTGTGAGTAATATTACTCAGGATGCACTTATATCTATTTGTAATTCAA
GAATAAATAAAAAGAAAAATTTTATACTTACAAAACTTGGAGCTTTGGTTTTTAAAGCTGAGGAGACATGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
85.987 |
100 |
0.86 |