Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   BL1202_RS17790 Genome accession   NZ_CP017247
Coordinates   3409537..3410418 (-) Length   293 a.a.
NCBI ID   WP_021837675.1    Uniprot ID   -
Organism   Bacillus licheniformis strain BL1202     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3404537..3415418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BL1202_RS17755 (BL1202_03632) - 3404746..3405222 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  BL1202_RS17760 (BL1202_03633) - 3405222..3405506 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  BL1202_RS17765 (BL1202_03634) mnhG 3405490..3405864 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  BL1202_RS17770 (BL1202_03635) - 3405904..3406293 (-) 390 WP_003184847.1 hotdog fold thioesterase -
  BL1202_RS17775 (BL1202_03636) comA 3406310..3406948 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  BL1202_RS17780 (BL1202_03637) comP 3407035..3409341 (-) 2307 WP_003184851.1 ATP-binding protein Regulator
  BL1202_RS17785 (BL1202_03638) comX 3409364..3409528 (-) 165 WP_003184853.1 competence pheromone ComX -
  BL1202_RS17790 (BL1202_03639) comQ 3409537..3410418 (-) 882 WP_021837675.1 polyprenyl synthetase family protein Regulator
  BL1202_RS17795 (BL1202_03640) degQ 3410607..3410747 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  BL1202_RS17805 (BL1202_03642) - 3411233..3411580 (+) 348 WP_231105863.1 SDR family oxidoreductase -
  BL1202_RS17810 (BL1202_03643) - 3411623..3412843 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -
  BL1202_RS17815 (BL1202_03644) - 3413022..3414491 (-) 1470 WP_003184866.1 nicotinate phosphoribosyltransferase -
  BL1202_RS17820 (BL1202_03645) - 3414509..3415060 (-) 552 WP_003184868.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 293 a.a.        Molecular weight: 33390.10 Da        Isoelectric Point: 4.6179

>NTDB_id=167265 BL1202_RS17790 WP_021837675.1 3409537..3410418(-) (comQ) [Bacillus licheniformis strain BL1202]
MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM
KINSSVAMNAATALYTISIKVIGSVSNDSCFFNKMMEYILQSSQGQHDDLSDKPVTENECLDMIKRKSGSLTALSCVLGT
MLATGKFNPTVESYALQLGIALQIENDYRGLFYNSKSDIVKNKRTLAYLYLKRKFNQSSIDLLKVFENEDKIADIEIKCY
KEKLKEAGVPQYMYVMIQLAIQKFRRGIAELELKQEEKKWLASFLLNKFDKED

Nucleotide


Download         Length: 882 bp        

>NTDB_id=167265 BL1202_RS17790 WP_021837675.1 3409537..3410418(-) (comQ) [Bacillus licheniformis strain BL1202]
ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA
GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG
CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG
AAAATCAACAGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA
CGATTCTTGCTTTTTTAATAAAATGATGGAATACATATTGCAATCTTCACAAGGGCAACATGATGATCTTAGTGATAAGC
CGGTTACGGAAAACGAATGCCTTGATATGATCAAGCGCAAATCTGGTTCATTGACAGCTCTTTCATGTGTTTTGGGAACC
ATGCTCGCTACAGGTAAATTTAATCCTACTGTTGAATCTTATGCACTCCAATTGGGCATTGCTTTACAGATCGAAAATGA
TTATAGAGGTCTTTTCTATAATTCAAAAAGCGATATTGTGAAAAATAAGCGAACACTTGCTTATTTATACTTGAAAAGAA
AATTTAATCAATCCTCAATTGATTTATTAAAAGTATTTGAAAATGAGGATAAAATTGCCGATATAGAAATAAAATGTTAT
AAAGAAAAATTGAAGGAAGCTGGTGTTCCCCAATATATGTATGTCATGATTCAGCTTGCTATTCAGAAATTTAGAAGAGG
AATAGCTGAGTTAGAGCTGAAACAAGAGGAAAAGAAATGGCTTGCTTCTTTCCTTTTGAACAAGTTTGATAAGGAGGATT
AA

Domains


Predicted by InterProScan.

(41-230)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

44.291

98.635

0.437