Detailed information NTG0167238

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: AL483_RS16825
• Genome accession: NZ_CP014016
• Coordinates: 805210..806184 (+)
• Length: 324 a.a.
• NCBI ID: WP_002481040.1
• Uniprot ID: -
• Organism: Staphylococcus simulans strain FDAARGOS_124
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 800210..811184

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL483_RS16795 (AL483_04065)	-	801019..801561 (+)	543	WP_002481046.1	5-formyltetrahydrofolate cyclo-ligase	-
AL483_RS16800 (AL483_04070)	-	801574..803031 (+)	1458	WP_002481045.1	rhomboid family protein	-
AL483_RS16805 (AL483_04075)	-	803015..803215 (+)	201	WP_002481044.1	YqgQ family protein	-
AL483_RS16810 (AL483_04080)	-	803215..804201 (+)	987	WP_002481043.1	ROK family glucokinase	-
AL483_RS16815 (AL483_04085)	-	804201..804530 (+)	330	WP_002481042.1	MTH1187 family thiamine-binding protein	-
AL483_RS16820 (AL483_04090)	-	804530..805153 (+)	624	WP_002481041.1	MBL fold metallo-hydrolase	-
AL483_RS16825 (AL483_04095)	comGA	805210..806184 (+)	975	WP_002481040.1	competence type IV pilus ATPase ComGA	Machinery gene
AL483_RS16830 (AL483_04100)	comGB	806156..807229 (+)	1074	WP_002481039.1	competence type IV pilus assembly protein ComGB	-
AL483_RS16835 (AL483_04105)	comGC	807258..807575 (+)	318	Protein_783	competence type IV pilus major pilin ComGC	-
AL483_RS16840 (AL483_04110)	comGD	807578..808003 (+)	426	WP_061054706.1	competence type IV pilus minor pilin ComGD	-
AL483_RS16845 (AL483_04115)	comGF	808222..808716 (+)	495	WP_002481036.1	competence type IV pilus minor pilin ComGF	-
AL483_RS16855 (AL483_04125)	-	808881..809420 (+)	540	WP_002481034.1	shikimate kinase	-
AL483_RS16860 (AL483_04130)	gcvT	809599..810693 (+)	1095	WP_002481033.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36968.00 Da
• Isoelectric Point: 7.7580

>NTDB_id=167238 AL483_RS16825 WP_002481040.1 805210..806184(+) (comGA) [Staphylococcus simulans strain FDAARGOS_124]
MKRLFEKILIDAIAQRVSDIHFIPIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFMKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT

Nucleotide

• Length: 975 bp

>NTDB_id=167238 AL483_RS16825 WP_002481040.1 805210..806184(+) (comGA) [Staphylococcus simulans strain FDAARGOS_124]
ATGAAAAGGCTATTTGAAAAAATTTTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACCAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATAACAACGTATCAGAAGTTAC
TTACTTTTATGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGCTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	60.991	99.691	0.608
comGA	Staphylococcus aureus N315	60.991	99.691	0.608
comGA	Bacillus subtilis subsp. subtilis str. 168	38.245	98.457	0.377